DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ver-4 and btl

DIOPT Version :9

Sequence 1:NP_509835.2 Gene:ver-4 / 186632 WormBaseID:WBGene00006897 Length:1216 Species:Caenorhabditis elegans
Sequence 2:NP_001014583.1 Gene:btl / 39564 FlyBaseID:FBgn0285896 Length:1052 Species:Drosophila melanogaster


Alignment Length:1266 Identity:276/1266 - (21%)
Similarity:468/1266 - (36%) Gaps:414/1266 - (32%)


- Green bases have known domain annotations that are detailed below.


 Worm    52 LTC-YGQHK---NLKIEPPKREEHAGFPEIGI-----RTSAEWKKNEYWFL------LKNVRQCD 101
            |.| ||.|:   ::.:|...|:.|. ..::.|     |..|:|...:.:.|      |:..:..:
  Fly    21 LGCDYGHHRCYIDVTVENSPRQRHL-LSDMDITLQCVRPMAKWFYEDKFQLRATLLRLERAQSGN 84

 Worm   102 TGSYYCVSDEFKESMLQNTVHIFVRKLDIFVPLKTIYHEHNGSEIIIPCKTTKFVDTKNVELYVN 166
            :|:|.|:..       ||..:        .:.|...:.|..|::|                  .:
  Fly    85 SGNYGCLDS-------QNRWY--------NISLVVGHKEPVGNDI------------------AS 116

 Worm   167 QVKLNSALQGYDQRYGFKLTKNMYTMKPNSTVFFECKYTNDSN-----QDLDYYI---------- 216
            .|||..|                 ...|.|.:||:  ..|:|.     |.|...:          
  Fly   117 FVKLEDA-----------------PALPESDLFFQ--PLNESRSLKLLQPLPKTVQRTAGGLFQL 162

 Worm   217 --SNSDPDATLIDQYFFYWEKSNDVPYVGNNYSITCHLVYIGSDSLRPLN----HQEIVLECPQN 275
              |..||||..::..:.:    ||...:|....|......:....|:|.:    |.|:   |.:.
  Fly   163 NCSPMDPDAKGVNISWLH----NDTQILGGRGRIKLKRWSLTVGQLQPEDAGSYHCEL---CVEQ 220

 Worm   276 QCDGGYNNQSAHEIEKRSSGLRFGDPSSQDIV-EKNT--MLRYDRLSVYDRKTS----RTVNFQN 333
            .|             :||      :|:..::: .|:|  ||:    ..|.|.||    ..|:.:.
  Fly   221 DC-------------QRS------NPTQLEVISRKHTVPMLK----PGYPRNTSIALGDNVSIEC 262

 Worm   334 LTSEDSGIY-RCTWRNRSKTNIVLDYDLNFNQKGTQIKIIETSKQRLKMRKNESTLLFVKFAVFP 397
            |. |||.:. :.||.::...:.:.|. |...::.:|:.:..|   ||..|.:|..:|        
  Fly   263 LL-EDSALEPKITWLHKGNADNIDDL-LQRLREQSQLPVDVT---RLITRMDEPQVL-------- 314

 Worm   398 INKKNYTAKWSRLYNSTVEGGQQVETIRNGFFRQITTKTSGRNVFLETLNLKSPKIEMSGIYVLS 462
                       ||.|..:|.|        |::..|.....||.|....::|.||....:   |.:
  Fly   315 -----------RLGNVLMEDG--------GWYICIAENQVGRTVAASYVDLYSPSDTTT---VRT 357

 Worm   463 ISNMDIVQQVKWII-------EVENDEPNAQLTIRDPL---------------TLNISNQLF--- 502
            .:...:...:....       :|||....|...:..|:               |:|::..::   
  Fly   358 TTTTTVASPIPTASTGEDNDDDVENPAAEASGGVGPPVFRKELKRLQHSLSGNTVNLACPVYGKA 422

 Worm   503 --------LPLNTNLSIFCLAVSSSPTDVIFEYRTDENEWFRGFYKNKLRKIDDTFEKGFIYNFV 559
                    .|||..|.::.                 :..|       .||.::.|.|...:||..
  Fly   423 NITWTKDKKPLNRELGVYV-----------------QKNW-------TLRFVEATSEDSGLYNCK 463

 Worm   560 LAK-----RTDFKCINVKKKKTSTKFITVTSNANKTFHEIEKSVNATKTEPSDIIFEGDNVRLTC 619
            :..     :.||. :.:..:..|...|.|..|..       ..||.             ::.:.|
  Fly   464 VCNAWGCIQFDFS-VQINDRTRSAPIIVVPQNQT-------VKVNG-------------SLVMKC 507

 Worm   620 VVPYGAVEFDVFWKFENPKMLKYTTFPAMHPVKDR-------YKRVILNVRNITIDFTGTYYCIV 677
            .| |..:...|.||   ..:||..:...:..|:.:       ...|:|.:||:|.|..|.|.|:.
  Fly   508 TV-YSDLHPTVSWK---RVVLKNASLDGLKSVEIQNLNFTVTNDSVVLTLRNVTFDQEGWYTCLA 568

 Worm   678 KNKEFEHRFETSISVEKVSPPFLLNNNSRSIISASNGQMFDINCKVNGVPTPDYTWFKDGYPYTK 742
            .:.  ..|..:|:.:..|||                            :|..:.......:|   
  Fly   569 SSG--LGRSNSSVYLRVVSP----------------------------LPPLEIYALLHAHP--- 600

 Worm   743 GKVIGNALHVSKAEKRDNGIFWCSATNRAGTTIDYIEVKVAGASSSSFFWLFITFFAFVVVGIVV 807
               :|..|                    |..||  :.:.:.|::       ||||          
  Fly   601 ---LGFTL--------------------AAITI--VALFLLGSA-------FITF---------- 623

 Worm   808 SLLWKLFGQKDLKPSELSLNNLKRATDEYQKYT--------VSEKINNLPV----EERIDYLT-- 858
             :|.:|..:|.||   |.:..:.:.|.:...|.        .|.....:||    ::|....|  
  Fly   624 -MLRRLRREKLLK---LRIETVHQWTKKVIIYRPGGEEGSGCSSGDLQMPVIRIEKQRTTVSTTG 684

 Worm   859 ---------YNE-------DYEIDLENLEILETLGSGQFGIVKKGYLNMASSKNFGFESRLS--- 904
                     :||       ::||..:.|.:...||.|.||.|.     ||.::......:|:   
  Fly   685 TGGTDPAQGFNEYEFPLDSNWEIPRQQLSLGSILGEGAFGRVV-----MAEAEGLPRSPQLAETI 744

 Worm   905 VAIK------SSTDSSNMELQKMFFEELKLMCAIPKHPNVLSLVGAVTKNMEIGELFIVTELIDG 963
            ||:|      :.||.:::      ..|:::|..|.||.|:::|:|..::.   |.|:::.|....
  Fly   745 VAVKMVKEEHTDTDMASL------VREMEVMKMIGKHINIINLLGCCSQG---GPLWVIVEYAPH 800

 Worm   964 GNLREFLRERRDVFANELVEKGYIFLTNVRENVPKREVEKEQLLIDE----FNSLCTSDLLSIGL 1024
            |||::||::.                   |...|:|..:.:..|.|:    ...|...:|.....
  Fly   801 GNLKDFLKQN-------------------RPGAPQRRSDSDGYLDDKPLISTQHLGEKELTKFAF 846

 Worm  1025 QIANGMDWLANIPCVHRDLACRNVLISKTKIIRIADFGLAKKHTDKAYYRVRESLDTPLPVRWMP 1089
            |||.||::||:..|:|||||.||||:|...:::|||||||:...|..||  |::.:..||::||.
  Fly   847 QIARGMEYLASRRCIHRDLAARNVLVSDGYVMKIADFGLARDIQDTEYY--RKNTNGRLPIKWMA 909

 Worm  1090 LESITDLTFTQKSDVWSYGICLYEIFTLGGTPYPDCPNF-SLVEYIKTGNINKRPSNCHKDVYKI 1153
            .||:.:..:..:|||||||:.|:||.|.|..|||...:. .|..|:.||...::|:.|..::|.:
  Fly   910 PESLQEKKYDSQSDVWSYGVLLWEIMTYGDQPYPHILSAEELYSYLITGQRMEKPAKCSLNIYVV 974

 Worm  1154 MKMCWQASPDDRPTFAECIKLFKNHIQYFAS 1184
            |:.||......||||||.::.|...:|..:|
  Fly   975 MRQCWHFESCARPTFAELVESFDGILQQASS 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ver-4NP_509835.2 ig 609..679 CDD:278476 18/76 (24%)
IG_like 611..692 CDD:214653 20/87 (23%)
IG_like 709..782 CDD:214653 7/72 (10%)
IGc2 714..772 CDD:197706 4/57 (7%)
STYKc 870..1175 CDD:214568 104/318 (33%)
PTKc 874..1176 CDD:270623 103/315 (33%)
btlNP_001014583.1 IG_like 149..232 CDD:214653 18/108 (17%)
IGc2 157..215 CDD:197706 12/61 (20%)
IG 247..336 CDD:214652 26/120 (22%)
Ig 258..340 CDD:143165 25/113 (22%)
I-set 394..479 CDD:254352 16/109 (15%)
IGc2 408..469 CDD:197706 13/84 (15%)
IG_like 492..583 CDD:214653 23/116 (20%)
Ig 507..583 CDD:299845 20/81 (25%)
PKc_like 700..1000 CDD:304357 107/334 (32%)
TyrKc 712..996 CDD:197581 104/318 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0200
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.