DRSC/TRiP Functional Genomics Resources

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Protein Alignment F52H2.4 and CG33124

DIOPT Version :9

Sequence 1:NP_001360058.1 Gene:F52H2.4 / 186132 WormBaseID:WBGene00018716 Length:491 Species:Caenorhabditis elegans
Sequence 2:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster


Alignment Length:471 Identity:126/471 - (26%)
Similarity:231/471 - (49%) Gaps:28/471 - (5%)


- Green bases have known domain annotations that are detailed below.


 Worm    10 VISFPIVAFVFLPVLYRLKLTTIYEYFERRFDYKCRFVTTSLFCVQMILYNSVALYAPSLAIASI 74
            ||....|::::|||...|::.:.|||...||....|.:.:.:|.::::||....::.|:||:...
  Fly   109 VIQGLAVSYIYLPVFSALQVRSSYEYLGMRFHPLIRNIVSIMFVIEVLLYTPFVVFVPALALNQA 173

 Worm    75 TNIPITVSILITAVLSAFYISVGGVKAGIHTSAIQMLLIFLTMTFIISISLREMS-IHDVYTSVV 138
            :.:.|.:..::..|:...|..:||:||.:||...|::::|.::..:..::...:: :.|.:.|:|
  Fly   174 SGLNIHMIEVLIIVVCVIYTLLGGLKAVVHTDIWQVVIMFASVVVVAILATCYITDLDDFFESLV 238

 Worm   139 HGKRFILNDFRINPTIRHSVWSLLIGGTGNILALFAANQLSIQRYMAMDTLKSAQKVVLLNIVCN 203
            .|.|.|..:...:|.:|::|||::|||.....::.|.:|..:.|||::..||.|:..:.. .|..
  Fly   239 DGGRLIFGNINPSPYVRNTVWSVVIGGAFYWTSITAVHQTMVHRYMSLPNLKMARTSIAF-FVLG 302

 Worm   204 TIILVSYVS-VGFLIYAHYKDCHP----QIGNANELLPRFVMDVTSKYPGSVGLFAAAVYSAGIS 263
            :||..|.:| :|.||:..||||.|    ||.|.::|:|.||:.......|..|||.|.::.||:|
  Fly   303 SIIFYSVLSFLGLLIFNMYKDCDPLSAGQIMNNDQLVPLFVVQSVGHIYGIPGLFIAGIFGAGLS 367

 Worm   264 TLSASFTAVSSIVINDVWKVYRERRKMAPLRNDQVQNAMRI-LPIVLSFISIFVAFLCSMLQSII 327
            :||....:.|.:::.|   :.|...||.|   .:..:|:.: ..||:....:|...|.....|.|
  Fly   368 SLSVFLNSTSLVILQD---IVRGCFKMQP---GETASAIIVKATIVIMGALVFGEVLLLEKVSGI 426

 Worm   328 LQVSFIVFGAGGGPVLGSFVVGLFVPRVKEKAALVGLIGSIIVCFSISIGSVLVKVKPVALELGQ 392
            |.:...:.........|.|.:.:.||........||.|...::...|:.||      .:|...||
  Fly   427 LSICMSLVAIATSSTFGIFTLAVLVPWANTVGTAVGGIAGFLLTGWITFGS------QIAAASGQ 485

 Worm   393 CSNQTLTYFDESFIGAVTSTPLVFGLER----IFAISYQYYSIIAVVTNVALSIVMQKLFELCSL 453
            ..:..|.....|..|.||:...|:..|.    :|.:|:.:.:.|..:|    .:|:..|..|.:.
  Fly   486 LHHHRLPVSVASCPGNVTARENVWVDEEQVFPLFRLSFHWINPIGALT----VVVVGSLVSLVTK 546

 Worm   454 TANHLPVSHELVSPLL 469
            ..:...:..:|:||::
  Fly   547 PTDIKSLDSDLISPVI 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
F52H2.4NP_001360058.1 SLC5-6-like_sbd 1..447 CDD:382020 121/447 (27%)
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 119/436 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4891
OMA 1 1.010 - - QHG29060
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 1 1.000 - - otm14518
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.780

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