DRSC/TRiP Functional Genomics Resources

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Protein Alignment smvt-1 and CG33124

DIOPT Version :10

Sequence 1:NP_001360058.2 Gene:smvt-1 / 186132 WormBaseID:WBGene00018716 Length:565 Species:Caenorhabditis elegans
Sequence 2:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster


Alignment Length:571 Identity:153/571 - (26%)
Similarity:277/571 - (48%) Gaps:50/571 - (8%)


- Green bases have known domain annotations that are detailed below.


 Worm     5 DY-----VTLLTCLISISAYGFIKSRKTENE---------------EQSVHATMVGS-RVSVWSA 48
            ||     ||:|:..|.: .:|:||..|.|.|               .:.::..::|| .:.|:..
  Fly    10 DYTVFLGVTILSIAIGL-YFGWIKKTKKEMESSPADTPEISIPNFGSKKMNEYLMGSGHLKVFPV 73

 Worm    49 TLSVCSGFISSISLLGFPAEIYYQGGMMLWFAPMYVISFPIVAFVFLPVLYRLKLTTIYEYFERR 113
            .:|:.:.|||.:::||.|:||||.|..........||....|::::|||...|::.:.|||...|
  Fly    74 AMSLIASFISGVAILGNPSEIYYYGTQYSLIVLAIVIQGLAVSYIYLPVFSALQVRSSYEYLGMR 138

 Worm   114 FDYKCRFVTTSLFCVQMILYNSVALYAPSLAIASITNIPITVSILITAVLSAFYISVGGVKAGIH 178
            |....|.:.:.:|.::::||....::.|:||:...:.:.|.:..::..|:...|..:||:||.:|
  Fly   139 FHPLIRNIVSIMFVIEVLLYTPFVVFVPALALNQASGLNIHMIEVLIIVVCVIYTLLGGLKAVVH 203

 Worm   179 TSAIQMLLIFLTMTFIISISLREMS-IHDVYTSVVHGKRFILNDFRINPTIRHSVWSLLIGGTGN 242
            |...|::::|.::..:..::...:: :.|.:.|:|.|.|.|..:...:|.:|::|||::|||...
  Fly   204 TDIWQVVIMFASVVVVAILATCYITDLDDFFESLVDGGRLIFGNINPSPYVRNTVWSVVIGGAFY 268

 Worm   243 ILALFAANQLSIQRYMAMDTLKSAQKVVLLNIVCNTIILVSYVS-VGFLIYAHYKDCHP----QI 302
            ..::.|.:|..:.|||::..||.|:..:.. .|..:||..|.:| :|.||:..||||.|    ||
  Fly   269 WTSITAVHQTMVHRYMSLPNLKMARTSIAF-FVLGSIIFYSVLSFLGLLIFNMYKDCDPLSAGQI 332

 Worm   303 GNANELLPRFVMDVTSKYPGSVGLFAAAVYSAGISTLSASFTAVSSIVINDVWKVYRERRKMAPL 367
            .|.::|:|.||:.......|..|||.|.::.||:|:||....:.|.:::.|   :.|...||.| 
  Fly   333 MNNDQLVPLFVVQSVGHIYGIPGLFIAGIFGAGLSSLSVFLNSTSLVILQD---IVRGCFKMQP- 393

 Worm   368 RNDQVQNAMRI-LPIVLSFISIFVAFLCSMLQSIILQVSFIVFGAGGGPVLGSFVVGLFVPRVKE 431
              .:..:|:.: ..||:....:|...|.....|.||.:...:.........|.|.:.:.||....
  Fly   394 --GETASAIIVKATIVIMGALVFGEVLLLEKVSGILSICMSLVAIATSSTFGIFTLAVLVPWANT 456

 Worm   432 KAALVGLIGSIIVCFSISIGSVLVKVKPVALELGQCSNQTLTYFDESFIGAVTSTPLVFGLER-- 494
            ....||.|...::...|:.||      .:|...||..:..|.....|..|.||:...|:..|.  
  Fly   457 VGTAVGGIAGFLLTGWITFGS------QIAAASGQLHHHRLPVSVASCPGNVTARENVWVDEEQV 515

 Worm   495 --IFAISYQYYSIIAVVTNVALSIVMQKLFELCSLTANHLPVSHELVSPLL 543
              :|.:|:.:.:.|..:|    .:|:..|..|.:...:...:..:|:||::
  Fly   516 FPLFRLSFHWINPIGALT----VVVVGSLVSLVTKPTDIKSLDSDLISPVI 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
smvt-1NP_001360058.2 SLC5sbd_NIS-SMVT 5..521 CDD:271383 148/547 (27%)
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 146/536 (27%)

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