DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Etv4 and pnt

DIOPT Version :9

Sequence 1:XP_006532521.1 Gene:Etv4 / 18612 MGIID:99423 Length:533 Species:Mus musculus
Sequence 2:NP_524461.2 Gene:pnt / 42757 FlyBaseID:FBgn0003118 Length:718 Species:Drosophila melanogaster


Alignment Length:343 Identity:98/343 - (28%)
Similarity:138/343 - (40%) Gaps:97/343 - (28%)


- Green bases have known domain annotations that are detailed below.


Mouse   175 SAYDSPRQIAIKSPAPGAPGQSPLQPFS--------------RAEQQQSLLRASSSSQSHPGHGY 225
            |:|..|..:|...   |..|..|....|              .|:..||...:..:.......|.
  Fly   455 SSYGLPAHLAAYG---GGSGSGPTGGRSSGGGGDESDYHSTISAQDHQSQQSSGGNGSGGASGGS 516

Mouse   226 LGEHSSVFQQPVDMCHSFTSPQGGGREPLPAPYQHQLSEPCPPYPQQNFKQEYHDPLYEQAGQPA 290
            .|..:.......:...|:     .||......|..:.:    ||..|:|:        ....||.
  Fly   517 TGNSNGYLDSSSEFYGSY-----AGRNRFHDGYPPEFT----PYDAQSFQ--------SMGPQPT 564

Mouse   291 SSQ--GGVSGHRYPGAGVVIKQERTDFAYDSDVPGCASMYLHPEGFSGPSPGDGVMGYGYEKSLR 353
            :..  |....|::|.|                       |:...|..     .|::| ||     
  Fly   565 AMDQWGAAHAHQHPAA-----------------------YMSTLGLD-----KGLLG-GY----- 595

Mouse   354 PFPDDVCIVPEKFEGDIKQEGIGAFREGPPYQRRGALQLWQFLVALLDDPTNAHFIAWTGRGMEF 418
                            ..|.|:      |.:...|.:||||||:.||.|.|...||:|||.|.||
  Fly   596 ----------------TTQGGV------PCFTGSGPIQLWQFLLELLLDKTCQSFISWTGDGWEF 638

Mouse   419 KLIEPEEVARLWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPD 483
            ||.:|:||||.|||:||:|.|||:||||.|||||:|.|:.|.||:||||:|||:.:.|.... |:
  Fly   639 KLTDPDEVARRWGIRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQNLVGHT-PE 702

Mouse   484 NQRPALKAEFDRPVSEED 501
            .    |.|::|..:.::|
  Fly   703 E----LVAKYDLKIEKKD 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Etv4XP_006532521.1 ETS_PEA3_N 54..388 CDD:368026 36/228 (16%)
ETS 390..473 CDD:197710 55/82 (67%)
pntNP_524461.2 SAM_PNT-ETS-1,2 179..250 CDD:188879
ETS 609..693 CDD:197710 55/83 (66%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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