DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TOR1A and tor1a

DIOPT Version :10

Sequence 1:NP_000104.1 Gene:TOR1A / 1861 HGNCID:3098 Length:332 Species:Homo sapiens
Sequence 2:NP_001016237.1 Gene:tor1a / 548991 XenbaseID:XB-GENE-943837 Length:327 Species:Xenopus tropicalis


Alignment Length:329 Identity:209/329 - (63%)
Similarity:264/329 - (80%) Gaps:3/329 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MKLGRAVLGLLLLAPSVVQAVEPISLGLALAGVLTGYIYPRLYCLFAECCGQKRSLSREALQKDL 65
            |||.||::.|||  |.:.|. |||:|.:....|:.|.:|..|.|.|.|||.|..:::..||:.|.
 Frog     1 MKLLRALIWLLL--PVLAQC-EPITLTVGALSVVGGAVYYGLQCYFQECCFQNGAINSTALELDF 62

Human    66 DDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVH 130
            |.|:|||||||::||..|.||:.|..||||||||.|||||||||::|:::|.|||..|..|.:||
 Frog    63 DSNIFGQHLAKRVILKGVTGFMKNKHPKKPLTLSFHGWTGTGKNYISQLLARNIYGHGTESQFVH 127

Human   131 LFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDG 195
            .|||||||||||.|..||||||.||:||||.|.||||||||:||||.|||||||||||||:.::|
 Frog   128 QFVATLHFPHASQIDKYKDQLQAWIKGNVSNCERSIFIFDEVDKMHPGLIDAIKPFLDYYEQLEG 192

Human   196 VSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDR 260
            :||:|.:||||||||.|.|:.:|||||::||:||||.|.::||.||::.||||:||||||.|||:
 Frog   193 ISYRKCIFIFLSNAGGEIISKLALDFWKNGKKREDINLFEVEHQLSLAAFNNKDSGFWHSGLIDK 257

Human   261 NLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTK 325
            ||||:||||||||::|:|||:|.|::.||||:||:||::||:|||:|||:|.|||.||||.|.||
 Frog   258 NLIDFFVPFLPLEFQHVKMCVRAELRQRGYEVDEEIVTKVAKEMTYFPKDENVFSVKGCKVVSTK 322

Human   326 LDYY 329
            |:||
 Frog   323 LEYY 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TOR1ANP_000104.1 Torsin 55..169 CDD:399367 73/113 (65%)
Interaction with SNAPIN 91..251 110/159 (69%)
Interaction with KLC1. /evidence=ECO:0000269|PubMed:14970196 251..332 56/79 (71%)
Interaction with SYNE3. /evidence=ECO:0000269|PubMed:18827015 312..332 13/18 (72%)
tor1aNP_001016237.1 P-loop containing Nucleoside Triphosphate Hydrolases 54..166 CDD:476819 73/111 (66%)
P-loop containing Nucleoside Triphosphate Hydrolases <162..224 CDD:476819 44/61 (72%)

Return to query results.
Submit another query.