DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdha2 and CG7024

DIOPT Version :9

Sequence 1:NP_032837.1 Gene:Pdha2 / 18598 MGIID:97533 Length:391 Species:Mus musculus
Sequence 2:NP_572182.1 Gene:CG7024 / 31407 FlyBaseID:FBgn0029722 Length:479 Species:Drosophila melanogaster


Alignment Length:379 Identity:183/379 - (48%)
Similarity:242/379 - (63%) Gaps:20/379 - (5%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 RKMLTAVLSHVFSGMVQKPALRGLLSSLKFSNDATCDIKKCDLYRLEEGPPTSTVLTRAEALKYY 66
            |.||..::.            |...|.|...|...|       |.||.||.....|:|.:||..|
  Fly    22 RNMLCRIIG------------RHKCSCLTLENTFKC-------YDLENGPTMDVELSREDALTMY 67

Mouse    67 RTMQVIRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPTDHVITSYRAHGFCYTRGLS 131
            ..|..:||.|..|...||::.|||||||.:||||..||::..:...|.|||:||.|.:.|..|:|
  Fly    68 TQMLELRRFETVAGNYYKERKIRGFCHLYNGQEAVAVGMKQRLRSCDSVITAYRCHAWTYLMGVS 132

Mouse   132 VKSILAELTGRKGGCAKGKGGSMHMYGKNFYGGNGIVGAQVPLGAGVAFACKYLKNGQVCLALYG 196
            :..|:|||.|.:.||::|||||||||...|||||||||||||||||:..|..|.|:..|.:.|||
  Fly   133 LYEIMAELFGVRTGCSRGKGGSMHMYSDKFYGGNGIVGAQVPLGAGIGLAHSYRKDNGVSVVLYG 197

Mouse   197 DGAANQGQVFEAYNMSALWKLPCVFICENNLYGMGTSNERSAASTDYHKKGFIIPGLRVNGMDIL 261
            ||||||||:||::||:.||.|||:|:||||.|||||..:|::|.|:::.:|..||||.|:|..:|
  Fly   198 DGAANQGQIFESFNMAKLWCLPCIFVCENNHYGMGTHVKRASAMTEFYMRGQYIPGLWVDGNQVL 262

Mouse   262 CVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRERII 326
            .||.||:||.||... .||||:|:.||||.||||||||.||||||||.:.|.|.|||...|.:||
  Fly   263 AVRSATQFAVDHALK-HGPIVLEMSTYRYVGHSMSDPGTSYRSREEVQSTREKRDPITSFRSQII 326

Mouse   327 SNNLSNIEELKEIDADVKKEVEDAAQFATTDPEPAVEDIANYLYHQDPPFEVRG 380
            :..|::.||||.:|...:|:|:...:.||||.|..::::...:|.::...::||
  Fly   327 ALCLADEEELKALDDKTRKQVDSICKKATTDREVELDELHTDIYAKNVDGKIRG 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdha2NP_032837.1 PDH_E1_alph_y 59..371 CDD:274473 166/311 (53%)
CG7024NP_572182.1 TPP_enzymes 37..381 CDD:294952 178/352 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834075
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54057
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001471
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100754
Panther 1 1.100 - - O PTHR11516
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X926
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.710

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