DRSC/TRiP Functional Genomics Resources

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Protein Alignment try-4 and CG18420

DIOPT Version :9

Sequence 1:NP_508030.4 Gene:try-4 / 185148 WormBaseID:WBGene00006622 Length:324 Species:Caenorhabditis elegans
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:363 Identity:72/363 - (19%)
Similarity:124/363 - (34%) Gaps:148/363 - (40%)


- Green bases have known domain annotations that are detailed below.


 Worm     1 MLCFSITALIIIFTVPVITFEPVWIGNAFSMESFQTIVDNEVLMESCGIQQESKI---------- 55
            ::...:.:::::.||                  |..:...:.|...||.:...|:          
  Fly     3 IVVIGMASILLLLTV------------------FPLLGSTQFLDSECGTRSPLKLGPRIVNGKVA 49

 Worm    56 --KNFPWAVSFTVDGVNRL--GGSIISPYHIITAAHGFITTIGSRGNLCENKNWKKPNSSIY--- 113
              .:.|| ::|.....|:.  ||::||...::||||.||                 ||::|.   
  Fly    50 VRNSSPW-MAFLHTSSNQFICGGTLISRRLVLTAAHCFI-----------------PNTTIVVRL 96

 Worm   114 ----RSIKFLRDTRKVAYGGTCIRGHTDKYPNDPRCKKSDVIHNKVRAVLVDGEFASSNCLKGHD 174
                |.:|..|:..:|.      |....:: .||....:|:                        
  Fly    97 GEYNRKLKGYREEHQVN------RTFQHRF-YDPNTHANDI------------------------ 130

 Worm   175 WAIVEVEKRIHFSENVRPICLP-----RPNMYYTKSLAVPGWGRSYIFNESGPL----IHEIPMR 230
             |::.:...:.:..|:||||:.     :.::...|.|...||||:...::|..|    |...|.:
  Fly   131 -ALLRLVSNVVYKANIRPICIMWDASWKHHIDSIKVLTGTGWGRTESMHDSSELRTLDISRQPSK 194

 Worm   231 I--------DRDCKRPWSDRLPADADDFICATSMNVSNYSAPRTCHGDSGG--GLEYRDDNYGRA 285
            :        ::.|...|:..|                       |.||:||  |...|   |..|
  Fly   195 MCAFGSVLSNQFCAGNWNSNL-----------------------CIGDTGGPVGAMVR---YRNA 233

 Worm   286 FL-----IAITSFGTRGC--PSNMLARFTRVDMYLNLI 316
            |.     ||||:   :.|  ||    .||.|..::..|
  Fly   234 FRFVQVGIAITN---KRCQRPS----VFTDVMSHIEFI 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
try-4NP_508030.4 Tryp_SPc 51..318 CDD:238113 66/313 (21%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 64/304 (21%)
Tryp_SPc 43..267 CDD:238113 65/305 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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