DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pax7 and ey

DIOPT Version :9

Sequence 1:XP_006538692.1 Gene:Pax7 / 18509 MGIID:97491 Length:505 Species:Mus musculus
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:783 Identity:208/783 - (26%)
Similarity:269/783 - (34%) Gaps:347/783 - (44%)


- Green bases have known domain annotations that are detailed below.


Mouse    38 VNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIG 102
            ||||||||:.|||||:..|.||||:||.|.|||.|||.|:||:|||||||.||.|||||||.|||
  Fly   101 VNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIG 165

Mouse   103 GSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKK 167
            ||||| |||.:|..||.:||||.|.:|:||||||||::..|....:||  ||||:||||....:|
  Fly   166 GSKPR-VATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPS--VSSINRVLRNLAAQK 227

Mouse   168 EDDE------------------------------------------------------------- 171
            |...                                                             
  Fly   228 EQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNS 292

Mouse   172 -EGDKKEEDGEK----------------------------------------------------- 182
             ||.::|...||                                                     
  Fly   293 GEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQ 357

Mouse   183 ----------------------------------------------------------------- 182
                                                                             
  Fly   358 QSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVA 422

Mouse   183 ----KAKHSIDGILGDK----------GNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELE 233
                ..|..:||...|:          |...:.|:..:.:..|.||||.:|:||:||.:|::.||
  Fly   423 TEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLE 487

Mouse   234 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ------------AGA-------- 278
            |.||||||||::.||.||.:..|.|||:|||||||||:||::            .||        
  Fly   488 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTS 552

Mouse   279 ---------NQLAAFNHLLPG--GFP----------PTGM------PTL--------PPYQLPDS 308
                     |.|:|.:.||.|  |.|          |:.:      |||        .|..:| .
  Fly   553 ATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIP-H 616

Mouse   309 TYPTTTISQDGG------STVHRPQPL---------------------------PPSTMHQGGLA 340
            ..|:.|...|.|      ..|..|.||                           |....:.|...
  Fly   617 IRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFG 681

Mouse   341 AAAA-----AADTSSAYGARHSFSSYSDSFMNPGAPSNHMNPVSNGLSPQVMSILSNPSAVPPQP 400
            |..:     |...|.:|||.....|::.|.:.|.||.:.: |....|:|..:.........||..
  Fly   682 AMYSNMHHTALSMSDSYGAVTPIPSFNHSAVGPLAPPSPI-PQQGDLTPSSLYPCHMTLRPPPMA 745

Mouse   401 QADFSISPLHG------GLDSASS--ISASCSQRADSIKPGDSLP-------------------- 437
            .|...|.|..|      ||.|..|  :.||||.....:....:||                    
  Fly   746 PAHHHIVPGDGGRPAGVGLGSGQSANLGASCSGSGYEVLSAYALPPPPMASSSAADSSFSAASSA 810

Mouse   438 ---------TSQSYCPPTYS---------TTGYSVDPVA---------GYQYSQYGQTAVDYLAK 475
                     .:|..||...|         ::|:|.||::         .|.|:....|.....|.
  Fly   811 SANVTPHHTIAQESCPSPCSSASHFGVAHSSGFSSDPISPAVSSYAHMSYNYASSANTMTPSSAS 875

Mouse   476 NVS 478
            ..|
  Fly   876 GTS 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pax7XP_006538692.1 PAX 34..161 CDD:128645 83/122 (68%)
Homeobox 220..274 CDD:365835 34/53 (64%)
Pax7 347..385 CDD:372070 11/37 (30%)
eyNP_001014693.1 PAX 98..221 CDD:128645 83/122 (68%)
Homeobox 475..527 CDD:278475 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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