Protein Alignment Pax6 and gsb-n

DIOPT Version :9

• Sequence 1: NP_001231127.1
• Gene: Pax6 / 18508
• MGIID: 97490
• Length: 436
• Species: Mus musculus
• Sequence 2: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Alignment Length: 422
• Identity: 155/422 - (36%)
• Similarity: 198/422 - (46%)
• Gaps: 111/422 - (26%)

Mouse     8 VNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVSNGCVSKILG 72
            ||||||||:||||||:..|.||||:|.||.|||.|||.|:              ||:|||||||.
  Fly    24 VNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLR--------------VSHGCVSKILN 74

Mouse    73 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSI 137
            ||.|||||||..||||||:|.:||:.::|.:.::|.||||:||||::|:.||..   :.||.|||
  Fly    75 RYQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFA---DPPSTSSI 136

Mouse   138 NRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTN 202
            :|:||.    ..:...||..|  ..:||..|
  Fly   137 SRLLRG----SDRGSEDGRKD--YTINGILG---------------------------------- 161

Mouse   203 SISSNGEDSD----EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDL 263
                 |.|||    |::..:.||||.:|:||:||.||:||||:.|.||.||||:.||.||....|
  Fly   162 -----GRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTAL 221

Mouse   264 PEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPV--SSFTSG 326
            .|||||||||||||:.|:.....|......|       |.|.:..|...:...|.|:  .....|
  Fly   222 TEARIQVWFSNRRARLRKHSGGSNSGLSPMN-------SGSSNVGVGVGLSGATAPLGYGPLGVG 279

Mouse   327 SMLGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCM------LPTSPSVNGRSYDT 385
            ||.|         ||                  |.|..|::.:.|      ...:||.:..:...
  Fly   280 SMAG---------YS------------------PAPGTTATGAGMNDGVHHAAHAPSSHHSAATA 317

Mouse   386 YTPPHMQTHMNSQPMGTSGTT---STGLISPG 414
            ....|..|.|....:..|...   ..|...||
  Fly   318 AAAAHHHTQMGGYDLVQSAAQHGFPGGFAQPG 349

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax6	NP_001231127.1	PAX	4..142	CDD:128645	75/133 (56%)
		Homeobox	228..281	CDD:395001	35/52 (67%)
gsb-n	NP_523862.1	PAX	20..141	CDD:278709	75/133 (56%)
		Homeobox	185..238	CDD:278475	35/52 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0849
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810