DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pax5 and sv

DIOPT Version :9

Sequence 1:NP_032808.1 Gene:Pax5 / 18507 MGIID:97489 Length:391 Species:Mus musculus
Sequence 2:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster


Alignment Length:427 Identity:177/427 - (41%)
Similarity:207/427 - (48%) Gaps:139/427 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKP 80
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||.|||||||.|.
  Fly   175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239

Mouse    81 GVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTKV-- 143
            |||||||||||||.||:.||.|||:||||||||||||||||.:|..|.||||||||||:|.|.  
  Fly   240 GVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNKAAE 304

Mouse   144 ------------------------------------QQPP-----------NQPVPASSHSIVST 161
                                                .|||           |....||.|:.:.|
  Fly   305 KAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHASIPT 369

Mouse   162 GSVTQVS-SVSTDSAGSS---------------YSISGILGI----------TSPSADTN----- 195
            .....|. ||...:|.|:               |||:|||||          .:.|.:.|     
  Fly   370 SGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNNTES 434

Mouse   196 --KRKRDEGIQESPVPNGHSLPGRDFLRKQM---RGDLFTQQQLEVLDRVFERQHYSDIFTTTEP 255
              ||||.|...|:...|.|| ...|..|::|   .||                |.|::|::....
  Fly   435 SCKRKRIEAHDENHDTNIHS-DNDDGKRQRMSTYSGD----------------QLYTNIWSGKWC 482

Mouse   256 IKPEQTTEYSAMASLAGGLDDMKANLTSPT---PADIGSSVPGPQSYPI------VTGRD----- 306
            ||    .::..:|.|        .|||:.|   ||....:..|..:.||      .:|.|     
  Fly   483 IK----DDHKLLAEL--------GNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLY 535

Mouse   307 -----LASTTLPGYPPHVPPA-GQGSYSAPTLTGMVP 337
                 ::.|....|.|.:.|: |.||     ||.:||
  Fly   536 DSITTISQTQSSIYTPAIGPSIGTGS-----LTPLVP 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pax5NP_032808.1 PAX 16..140 CDD:128645 109/123 (89%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 53/55 (96%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 36/47 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..218 16/52 (31%)
Pax2_C 285..389 CDD:289189 19/73 (26%)
svNP_524633.3 PAX 175..299 CDD:128645 109/123 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 229 1.000 Domainoid score I2462
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I3038
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D268681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43631
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5005
SonicParanoid 1 1.000 - - X862
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.960

Return to query results.
Submit another query.