DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pax5 and ey

DIOPT Version :9

Sequence 1:NP_032808.1 Gene:Pax5 / 18507 MGIID:97489 Length:391 Species:Mus musculus
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:545 Identity:162/545 - (29%)
Similarity:214/545 - (39%) Gaps:215/545 - (39%)


- Green bases have known domain annotations that are detailed below.


Mouse    17 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPG 81
            |.||||||||||.||||||..||:||||||.|.|||||||.|:||:||||||||||||||||:|.
  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPR 162

Mouse    82 VIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTKVQQP 146
            .||||||:|||.:||.||::|||:.|::||||||||||.|.||.||.:||||||||::|....|.
  Fly   163 AIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQK 227

Mouse   147 PNQPVPASSHSIVSTGSVT---------QVSSVSTDSAGSSYSISGILGITSP--------SADT 194
            ..|...:.|.|..:..|::         .||:|::.|.|:..|.:.::...:|        ::::
  Fly   228 EQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNS 292

Mouse   195 NKRKRDEGIQE------------------------------------------------------ 205
            .:....|.|.|                                                      
  Fly   293 GEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGTRSSHPQLVHGNHQALQQHQQ 357

Mouse   206 ----------------------SPVPN-------------GHSL-PGRDF--------------- 219
                                  |..||             .||| |..|.               
  Fly   358 QSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCPVA 422

Mouse   220 -----LRKQMRG-----------------------------------------DLFTQQQLEVLD 238
                 |:|::.|                                         ..||..|::.|:
  Fly   423 TEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLE 487

Mouse   239 RVFERQHYSDIFT---------------------------TTEPIKPEQTTEYSAMASLAGGLDD 276
            :.|||.||.|:|.                           ..|.::.::.|..|..||.......
  Fly   488 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTS 552

Mouse   277 MKANLT-SPTPADIGSSV----PGPQSYPIVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMV 336
            ..|:|| ||......||:    .|..|...:.|....||.            ..:.:||||...:
  Fly   553 ATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTL------------STNVNAPTLGAGI 605

Mouse   337 PGSEFSGSPYSH--PQYSSYNDSWR 359
            ..|| |.:|..|  |..:|.||:.|
  Fly   606 DSSE-SPTPIPHIRPSCTSDNDNGR 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pax5NP_032808.1 PAX 16..140 CDD:128645 93/122 (76%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 46/55 (84%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 32/47 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..218 11/133 (8%)
Pax2_C 285..389 CDD:289189 21/81 (26%)
eyNP_001014693.1 PAX 98..221 CDD:128645 93/122 (76%)
Homeobox 475..527 CDD:278475 11/51 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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