Protein Alignment Pax4 and gsb-n

DIOPT Version :9

• Sequence 1: NP_035168.1
• Gene: Pax4 / 18506
• MGIID: 97488
• Length: 349
• Species: Mus musculus
• Sequence 2: NP_523862.1
• Gene: gsb-n / 38004
• FlyBaseID: FBgn0001147
• Length: 449
• Species: Drosophila melanogaster
• Alignment Length: 363
• Identity: 131/363 - (36%)
• Similarity: 177/363 - (48%)
• Gaps: 58/363 - (15%)

Mouse     5 GLSSVNQLGGLFVNGRPLPLDTRQQIVQLAIRGMRPCDISRSLKVSNGCVSKILGRYYRTGVLEP 69
            |...||||||:|:||||||...|.:||::|..|:|||.|||.|:||:|||||||.||..||.:.|
  Fly    20 GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRP 84

Mouse    70 KCIGGSKPRLATPAVVARIAQLKDEYPALFAWEIQHQLCTEGLCTQDKAPSVSSINRVLRAL--- 131
            ..||||||::.:|.:..||.:|:.|.|::|:|||:.:|..||..   ..||.|||:|:||..
  Fly    85 GVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFA---DPPSTSSISRLLRGSDRG 146

Mouse   132 QEDQSLHWTQLRSPAVLAPVLPSPHSNC----GAPRGPHPGTSHRNRTIFSPGQAEALEKEFQRG 192
            .||....:|       :..:|....|:.    ..|..|......|:||.|:..|.||||:.|.|.
  Fly   147 SEDGRKDYT-------INGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRT 204

Mouse   193 QYPDSVARGKLAAATSLPEDTVRVWFSNRRAKWRRQEKLKWEAQLPGASQDLTVPKNS------P 251
            ||||...|.:||..|:|.|..::||||||||:.|:..         |.|.....|.||      .
  Fly   205 QYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHS---------GGSNSGLSPMNSGSSNVGV 260

Mouse   252 GI-ISAQQSP---GSVPSAALPVLEPLSPSFCQLCCGTAPGRCSSDTSSQAYLQPYWDCQSLLPV 312
            |: :|...:|   |.:...::....|...:       ||.|...:|....|...|
  Fly   261 GVGLSGATAPLGYGPLGVGSMAGYSPAPGT-------TATGAGMNDGVHHAAHAP---------- 308

Mouse   313 ASSSYVEFAWPCLTTHPVHHL-IGGPGQVPSTHCSNWP 349
              ||:...|......|  ||. :||...|.|.....:|
  Fly   309 --SSHHSAATAAAAAH--HHTQMGGYDLVQSAAQHGFP 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pax4	NP_035168.1	PAX	5..129	CDD:128645	65/123 (53%)
		PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381	8..64		36/55 (65%)
		RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381	83..131		20/47 (43%)
		Homeobox	174..226	CDD:278475	28/51 (55%)
		Transcription repression	278..349		16/71 (23%)
gsb-n	NP_523862.1	PAX	20..141	CDD:278709	65/123 (53%)
		Homeobox	185..238	CDD:278475	28/52 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0849
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810