DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pax3 and al

DIOPT Version :10

Sequence 1:NP_001152992.1 Gene:Pax3 / 18505 MGIID:97487 Length:484 Species:Mus musculus
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:392 Identity:110/392 - (28%)
Similarity:147/392 - (37%) Gaps:134/392 - (34%)


- Green bases have known domain annotations that are detailed below.


Mouse   165 GEEEEADLERKEAEESEKKAKHSIDGILSERA--------------------------------- 196
            |..||..||..   ..|.|..|....:|.:||                                 
  Fly     2 GISEEIKLEEL---PQEAKLAHPDAVVLVDRAPGSSAASAGAALTVSMSVSGGAPSGASGASGGT 63

Mouse   197 SAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 261
            ::|.||..||.:::...| ||||||.|||||:.||||||:||.||||||::||||||.:..||||
  Fly    64 NSPVSDGNSDCEADEYAP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 127

Mouse   262 RVQVWFSNRRARWRKQAGAN-QLMAFNHLIPGG-----------FPP------------------ 296
            |:||||.||||:||||.... |...:|..:|||           .||                  
  Fly   128 RIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQH 192

Mouse   297 ------------TAMPTLPTYQLSETS--------------YQPTSIPQAVSDPSSTVHRPQPL- 334
                        :|.|.:|:...::..              |.|:|..|::....:.|.|..|| 
  Fly   193 AANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLG 257

Mouse   335 -PPSTV----------HQSTIPSNADSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPTIG--- 385
             ||:.:          |....|..:        |::.|...........|..|..|....:|   
  Fly   258 KPPALLVGSPDLHSPNHMLASPPTS--------PASGHASQHQQHPTAHPPPPQAPPQMPVGVQP 314

Mouse   386 NGLSPQ-VMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLEHMKNVDSLPTSQPYC 449
            ..|||| ::|:               ||:.....|.||.|...:.:  |.|.......|.|....
  Fly   315 AQLSPQHLVGI---------------ALTQQASSLSPTQTSPVALT--LSHSPQRQLPPPSHQAP 362

Mouse   450 PP 451
            ||
  Fly   363 PP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pax3NP_001152992.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 27/95 (28%)
Homeodomain 220..276 CDD:459649 41/55 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 12/67 (18%)
Pax7 347..391 CDD:403540 8/46 (17%)
alNP_722629.1 Homeodomain 86..142 CDD:459649 41/55 (75%)
OAR 374..391 CDD:461067
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.