DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak1 and Pak3

DIOPT Version :9

Sequence 1:NP_001344291.1 Gene:Pak1 / 18479 MGIID:1339975 Length:552 Species:Mus musculus
Sequence 2:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster


Alignment Length:563 Identity:230/563 - (40%)
Similarity:322/563 - (57%) Gaps:98/563 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    74 EISLPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKSEQKKNPQAVLDVLEFYN--SKKT 136
            ||..|::|:...||..:..||:..|:|..|.||: .|.||:.||.|||.|....:::||  .||.
  Fly    19 EIGAPTNFQRHFHVSRNQETGDLEGLPAPWVRLM-NSQITRDEQDKNPDAAYHAVKYYNYSIKKK 82

Mouse   137 SNS------------------QKYMSFTDK----------------------------SAEDYNS 155
            .|.                  :.|:::.:|                            ||.:.||
  Fly    83 ENEVFKPFITEDVIHEESKEIENYVNYKNKHKSQDPEKSDDDGSSTATETESSSGCGSSAGNSNS 147

Mouse   156 S-------------------------NTLNVKTVSETPAVPPVSEDEDDDDDATPPPVIAPRPEH 195
            |                         |..:.:|:...|..||....:.......|.|.|.|:|..
  Fly   148 SSINDSSQQSTVPLDALEEVFKELKTNLEHRETLKAAPQEPPPVPPKKSPHTIPPKPQIKPKPRV 212

Mouse   196 TKSFGQ----------KDQREVYTRSVIEPLPVTPTRDVATSPISPTENNTTPPDALTRNTEKQK 250
            |:.|.:          .:|.::.|.::|.. |....:| |.:..:|.|.      .|.|:.||:.
  Fly   213 TQKFSRTSDIRRDEDSDNQHKINTDTIIIK-PAVGAQD-AGADDNPDET------ILRRSKEKRA 269

Mouse   251 KKPKMSDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPK 315
            :|   :|.||..:||:|.:..||:::|...:::|:||||.|:.|.|:....:||:|.::::.|..
  Fly   270 QK---TDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFIAADLQNESQVAVKTIDMKNQSS 331

Mouse   316 KELIINEILVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 378
            |:||:.||.|:::..:.|:||:||:||:  .|:|||||||:.||.||||||||.|.|.|||.|||
  Fly   332 KDLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDGGPLTDVVTETVMKERQIACVCR 396

Mouse   379 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 443
            |.|.|:.|||:..:|||||||||:|||||||||:|||||||.|..:: ||.||||||||||||||
  Fly   397 ETLYAISFLHAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCANIEGDE-KRQTMVGTPYWMAPEVV 460

Mouse   444 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 508
            |||.||.||||||:||||||||||:||||.|.|||||||||.||.|::::.:|||...:|||:||
  Fly   461 TRKKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAANGRPDIKSWDKLSPNLQDFLDRC 525

Mouse   509 LEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 551
            |:::|::|.:|.|||.|.||.....:.:|.|.|.|||:..:.|
  Fly   526 LQVEVDRRATADELLSHPFLNDCSEVKALVPNIKAAKKVLRRN 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pak1NP_001344291.1 PBD 74..128 CDD:334253 22/53 (42%)
STKc_PAK1 256..551 CDD:270820 170/296 (57%)
Pak3NP_001262638.1 PBD 19..73 CDD:279166 22/54 (41%)
PKc_like 288..545 CDD:304357 156/257 (61%)
S_TKc 293..545 CDD:214567 154/252 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0578
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 1 1.000 - - FOG0000763
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100484
Panther 1 1.100 - - O PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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