DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment his-54 and His2B:CG33868

DIOPT Version :9

Sequence 1:NP_505279.2 Gene:his-54 / 184117 WormBaseID:WBGene00001928 Length:123 Species:Caenorhabditis elegans
Sequence 2:NP_001027385.1 Gene:His2B:CG33868 / 3772265 FlyBaseID:FBgn0053868 Length:123 Species:Drosophila melanogaster


Alignment Length:124 Identity:101/124 - (81%)
Similarity:110/124 - (88%) Gaps:5/124 - (4%)


- Green bases have known domain annotations that are detailed below.


 Worm     3 PPKPSAKGAKKAA---KTVTKPKDGKKRRHARKESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFV 64
            |||.|.|.||||.   |.:||....|||:  |||||::|||:||||||||||:||||||||||||
  Fly     2 PPKTSGKAAKKAGKAQKNITKTDKKKKRK--RKESYAIYIYKVLKQVHPDTGISSKAMSIMNSFV 64

 Worm    65 NDVFERIAAEASRLAHYNKRSTISSREIQTAVRLILPGELAKHAVSEGTKAVTKYTSSK 123
            ||:||||||||||||||||||||:||||||||||:||||||||||||||||||||||||
  Fly    65 NDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
his-54NP_505279.2 H2B 25..121 CDD:197718 85/95 (89%)
His2B:CG33868NP_001027385.1 H2B 33..121 CDD:197718 80/87 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165133
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1744
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H128594
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100082
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.730

Return to query results.
Submit another query.