DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc22a6 and CarT

DIOPT Version :9

Sequence 1:NP_032792.2 Gene:Slc22a6 / 18399 MGIID:892001 Length:545 Species:Mus musculus
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:564 Identity:154/564 - (27%)
Similarity:264/564 - (46%) Gaps:50/564 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 NDLLKQVGGVGRFQLIQVTMVVAPLLL---MASHNTLQNFTAAIPAHH-CRPPANANLSKDGGLE 64
            :|||..:|..|::|.:.|..:..|..:   ..:.|.|  |.|..|..: ||.|...:|..:....
  Fly    37 DDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQL--FMADTPDDYWCRIPELLDLPLEQRKS 99

Mouse    65 AWLP--LDKQGRPES-CLRFPFPHNGTEANGTG------VTEP--------CLDGWVYDNSTFPS 112
            ..:|  ||......| |  :.:..|.|:...:|      ..||        |..||.|:.|...|
  Fly   100 LSIPKELDNDELVYSKC--YTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQGWEYNTSVVWS 162

Mouse   113 TIVTEWNLVCSHRAFRQLAQSLFMVGVLLGAMMFGYLADRLGRRKVLILNY---LQTAVSGT-CA 173
            :||.:::|||....:..:..:....|..:|..:||.|.||.|||    |:|   |.|.::|: ..
  Fly   163 SIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRR----LSYFVCLATLLAGSLMT 223

Mouse   174 AYAPNYTVYCIFRLLSGMSLASIAINCMTLNMEWMPIHTRAYVGTLIGYVYSLGQFLLAGIAYAV 238
            :.:.::..:...|::.|:::.::......:::|.:..:.|::|..:....|:.|..||:|:.|..
  Fly   224 SLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLE 288

Mouse   239 PHWRHLQLAVSVPFFVAFIYSWFFIESARWYSSSGRLDLTLRALQRVARINGKQEEGA---KLSI 300
            ..|..|....|:||:..|:|.:...||.||....|||:..|:.|:|:|::||::...|   ||..
  Fly   289 RDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEA 353

Mouse   301 EVLQTSL--QKELTLNKGQASAMELLRCPTLRRLFLCLSMLWFATSFAYYGLVMDLQGFGVSMYL 363
            ::.:..|  ||:...|.|.|   :|.|.|.:|...:.:::.|||....|.||.......|.:.|:
  Fly   354 QIRRDKLKKQKKKMANVGLA---DLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYV 415

Mouse   364 IQVIFGAVDLPAKFVCFLVINSMGRRPAQLASLLLAGICILVNGIIPRGHTIIRTSLAVLGKGCL 428
            ...:...|:||:...|:..:::.|||.....|::|.|:..::..::|.........|.::.|..|
  Fly   416 SFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALL 480

Mouse   429 ASSFNCIFLYTGELYPTMIRQTGLGMGSTMARVGSIVSPLISMTAEFYPSIPLFIFGAVPVAASA 493
            ::||..|:.:.||||||.:|..|:|..|.:..:|.|..|.|:...:....:||.|.|.:.:....
  Fly   481 SASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGM 545

Mouse   494 VTALLPETLGQPLPDTVQD---------LKSRSRGKQKQQQLEQ 528
            ....|||||...||.|:::         .|...|..||.:.|.|
  Fly   546 TGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCCRCAQKPEILSQ 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a6NP_032792.2 2A0119 11..509 CDD:273328 144/527 (27%)
MFS 129..499 CDD:119392 102/378 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 515..545 5/14 (36%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 144/527 (27%)
MFS 182..551 CDD:119392 102/375 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9078
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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