DRSC/TRiP Functional Genomics Resources

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Protein Alignment RCAN1 and rcan1a

DIOPT Version :10

Sequence 1:NP_001272320.2 Gene:RCAN1 / 1827 HGNCID:3040 Length:277 Species:Homo sapiens
Sequence 2:NP_001003616.1 Gene:rcan1a / 445222 ZFINID:ZDB-GENE-040801-135 Length:210 Species:Danio rerio


Alignment Length:202 Identity:118/202 - (58%)
Similarity:151/202 - (74%) Gaps:15/202 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    72 TSASPRLLAVNIPEDTLLSYPESSLPLQRHCAFHRFSKAKFESLFRTYDKDITFQYFKSFKRVRI 136
            |..:..|:|..:|.|.        ..::.|.      :|.||.|||.:|:::|||:||||:||||
Zfish    18 TDLTDSLVAWKVPVDV--------FDIESHL------RAGFEDLFRAFDRNVTFQFFKSFRRVRI 68

Human   137 NFSNPFSAADARLQLHKTEFLGKEMKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVE 201
            ||:|..:||:||.:|||::|.|:|::|||||::||||.||.||.||||||:|||.||||||:|.:
Zfish    69 NFTNALAAAEARAKLHKSDFNGRELRLYFAQSVHIGSPHLEPPKPDKQFLLSPPPSPPVGWEQAK 133

Human   202 DATPVINYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQEKE-EEEEMERMRRPKPKIIQ 265
            |||||||||||.||::|||||||||...|.||||||||||::|||.. .||:|:...|.:|||||
Zfish   134 DATPVINYDLLCAIARLGPGEKYELQPGTPTTPSVVVHVCDNDQESSGNEEDMDGGVRQRPKIIQ 198

Human   266 TRRPEYT 272
            |||||||
Zfish   199 TRRPEYT 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RCAN1NP_001272320.2 Calcipressin 109..270 CDD:282674 108/161 (67%)
rcan1aNP_001003616.1 RRM_RCAN1 22..115 CDD:410107 50/106 (47%)

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