DRSC/TRiP Functional Genomics Resources

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Protein Alignment DSCAM and CG34353

DIOPT Version :9

Sequence 1:NP_001380.2 Gene:DSCAM / 1826 HGNCID:3039 Length:2012 Species:Homo sapiens
Sequence 2:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster


Alignment Length:513 Identity:123/513 - (23%)
Similarity:207/513 - (40%) Gaps:79/513 - (15%)


- Green bases have known domain annotations that are detailed below.


Human   584 STSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPI--PGSLGVTID 646
            |.|....:|...|.||...|..:|..|:.:.:||.|.:.|..: :.| |.|..|  .||:.||.|
  Fly    74 SVSAQSMMTKNEPMFISRSETFKFITGETIVLPCEVANTDTYV-VAW-KRGIAILTAGSVKVTPD 136

Human   647 -NIDFTS--SLRISNLSLMHNGNYTC-IARNEAAAVEHQSQLIVRVPPKF-------VVQPRDQD 700
             .:...:  :|:|.:......|:|.| ||..:...:.|..:::  |||:.       .:|.:.  
  Fly   137 PRVRLVNGFNLQIRDALPTDAGDYICQIATMDPREITHTVEIL--VPPRIHHISTGGHLQVKK-- 197

Human   701 GIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYL 765
               |.:|.:.|||.|.|:|.:.|.....        |..||. :.|.:..|.|::|.....|.|:
  Fly   198 ---GSSVRIECSATGNPMPNVTWSRKNN--------ILPNGE-EKLHSHVLSIENVDRHKGGVYI 250

Human   766 CKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINP 830
            |..:|.||...|..:.|.|.....|:.......:.:|.:..:.|..|||....|.|.|:...:: 
  Fly   251 CTANNRVGQPASSQVVLHVLFSPEISVERPVVFSGEGHEATLVCIVHGETQPEVIWFKDTMQLD- 314

Human   831 EMARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLT----VQEPPDPPEI 891
            ...|:::.|:  |..  .||.|.....:|.|.:||.|.|..|:.|..:||:    |.....||..
  Fly   315 TTERHIMETR--GSR--HTLIIRKVHPQDFGNYSCVAENQLGKARKTLQLSGKPNVAVFNSPPIS 375

Human   892 EIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTY 956
            :.||    ...:.|.:  |.:|||..|.:..:......:......|.|   :|::.:....|..|
  Fly   376 QYKD----RYNISWAV--DSHSPIEEYKLSFRKLPQGHEVVGNAIDSS---SSSSSMSSSSSQMY 431

Human   957 SIRMYAKNRIGKSEPSNELTITADEAAPDGPPQEVH------------LEPIS-----SQSIRVT 1004
            ...::| :|||.:  ...|:..:...:..|....:|            ..|:|     ..|..|.
  Fly   432 GSGLHA-HRIGSN--MGGLSGLSGSGSYSGYGNVIHWGHNDWRNVVLPAVPVSHHYAQGMSYMVR 493

Human  1005 WKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISVDTSGDSEVYTLDNLNKFTQYGL 1062
            ...|.:|.:..:....:.|:.:.:  .:|.|:    .:|.|..|    :|:.|..:||
  Fly   494 GLDPDQHYEATVQSRNRYGWSDLT--NSFVFS----TSSNDGPV----DLSTFLNHGL 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DSCAMNP_001380.2 Ig 45..113 CDD:319273
I-set 235..310 CDD:254352
I-set 315..385 CDD:333254
Ig_3 407..488 CDD:316449
IGc2 518..575 CDD:197706
I-set 596..686 CDD:333254 27/95 (28%)
Ig_DSCAM 707..784 CDD:143211 23/76 (30%)
Ig 802..889 CDD:325142 25/90 (28%)
FN3 885..978 CDD:238020 20/92 (22%)
FN3 986..1083 CDD:238020 18/94 (19%)
FN3 1091..1184 CDD:238020
FN3 1189..1278 CDD:238020
Ig 1303..1369 CDD:319273
FN3 1380..1470 CDD:238020
FN3 1486..1555 CDD:238020
Required for netrin-mediated axon repulsion of neuronal growth cones. /evidence=ECO:0000250|UniProtKB:Q9ERC8 1617..2012
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1718..1810
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1855..1883
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1971..2012
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 22/83 (27%)
Ig 103..177 CDD:143165 21/75 (28%)
IG_like 191..269 CDD:214653 25/91 (27%)
IGc2 198..258 CDD:197706 20/68 (29%)
I-set 273..360 CDD:254352 23/91 (25%)
Ig 290..359 CDD:143165 21/73 (29%)
FN3 <466..524 CDD:238020 9/63 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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