Protein Alignment C18B12.4 and DMA1

DIOPT Version :9

• Sequence 1: NP_510498.1
• Gene: C18B12.4 / 181600
• WormBaseID: WBGene00007666
• Length: 456
• Species: Caenorhabditis elegans
• Sequence 2: NP_011983.1
• Gene: DMA1 / 856515
• SGDID: S000001157
• Length: 416
• Species: Saccharomyces cerevisiae
• Alignment Length: 301
• Identity: 61/301 - (20%)
• Similarity: 107/301 - (35%)
• Gaps: 83/301 - (27%)

 Worm    39 EEELVHKCLAKGGNFGMDVSDFIISEENLGCGVGV--EPV---DACGPVRIAQNHTTRCHNLFAF 98
            ::..:.:.:.|.|.|.:.::.||.:........|:  :|:   ...|...|...:|.|.
Yeast   140 DQSTLKRRMDKHGLFSIRLTPFIDTSSTSVANQGLFFDPIIRTAGAGSQIIIGRYTERV------ 198

 Worm    99 VSRSNIS------HPCKF-------SHQAFMVQNSTYPFRLVIFYNYPGQEPISMEGTELRDKVN 150
              |..||      ||..|       :|..|.|.:..         |:..::..|..||.|..:
Yeast   199 --REAISKIPDQYHPVVFKSKVISRTHGCFKVDDQG---------NWFLKDVKSSSGTFLNHQ-- 250

 Worm   151 IPVLMISHACKEEIAKKFSDTAGYRLRVRIDPGYYELFRYLIPFLVVIVFCFALFLITLCVRGCV 215
                .:|.|..........|....:|.:....|..|::|                    ||:..:
Yeast   251 ----RLSSASTTSKDYLLHDGDIIQLGMDFRGGTEEIYR--------------------CVKMKI 291

 Worm   216 ERRK--------LNKRRLSK-RNLKKIPVKKYRLGDDPDTCAICLESFASGEKLRHLPCRHVFHC 271
            |..|        .||..||: :||:|:..     |.:.:.|:|||......:.:...||.|.:|.
Yeast   292 ELNKSWKLKANAFNKEALSRIKNLQKLTT-----GLEQEDCSICLNKIKPCQAIFISPCAHSWHF 351

 Worm   272 NCID--VWLTQTRKICPLCKRK------IGTDSDSECSTND 304
            :|:.  |.:...:.:||.|:..      :.::|:||....|
Yeast   352 HCVRRLVIMNYPQFMCPNCRTNCDLETTLESESESEFENED 392

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C18B12.4	NP_510498.1	PA	<74..176	CDD:333703	22/117 (19%)
		HRD1	<223..>335	CDD:227568	23/91 (25%)
		RING-H2_RNF103	246..291	CDD:319387	13/46 (28%)
DMA1	NP_011983.1	FHA	121..308	CDD:224630	38/210 (18%)
		RING-H2_Dmap_like	325..371	CDD:319372	12/45 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000