Protein Alignment C18B12.4 and rnf13

DIOPT Version :9

• Sequence 1: NP_510498.1
• Gene: C18B12.4 / 181600
• WormBaseID: WBGene00007666
• Length: 456
• Species: Caenorhabditis elegans
• Sequence 2: NP_957338.1
• Gene: rnf13 / 793981
• ZFINID: ZDB-GENE-040426-772
• Length: 377
• Species: Danio rerio
• Alignment Length: 379
• Identity: 103/379 - (27%)
• Similarity: 162/379 - (42%)
• Gaps: 83/379 - (21%)

 Worm    63 SEENLGCGVGVEPVDACGPVRIAQNHTTRCHNLFAFVSRSNISHPCKFSHQAFMVQNSTYPFRLV 127
            ||...|..:|..|.:||.|:................:.|.:    |.|..:....|.:.|  :..
Zfish    61 SEGLKGFLIGARPENACVPIEPPPQRENLSSAFIVLIRRFD----CNFDIKVLHAQKAGY--KAA 119

 Worm   128 IFYNYPGQEPISM--EGTELRDKVNIPVLMISHACKEEIAKKFSDTAGYRL--RVRIDPGY-YEL 187
            |.:|....:.|||  |..::..:::||.:.|.    ||.|....:...|..  .|.:.|.: ..|
Zfish   120 IVHNVDSDDLISMGSEDLDILKQIDIPSVFIG----EEAANSLKEDYIYEKGGHVILMPDFSLPL 180

 Worm   188 FRYLIPFLVVIVFCFALFLITLCVRGCVERRKLNKRRLSKRNLKKIPVKKYRLGDDPDTCAICLE 252
            ..||||||:::..|..|.::.:..:...:|.:..:.||.|..|||:|:.|::.||..|.|||||:
Zfish   181 EYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKFKKGDSYDVCAICLD 245

 Worm   253 SFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLCKRK-IGTDSDSECSTNDLASTSQGPNDAT 316
            .:..||:||.|||.|.:||.|:|.|||:|:|.||:||:| :.:|.|||..::.:.|..:
Zfish   246 EYEEGERLRVLPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSDGDSESDSDSVDSGGE------ 304

 Worm   317 ALYNNADNQSGFELPVPQGQMVDLWSSQEALVDQDIVLHNTTRRSITGFVRNAFRKLRNSPRHRD 381
                  ||:.....|:                          .||:.....::|..:..|
Zfish   305 ------DNEVSENTPL--------------------------LRSLASTSAHSFGSMSAS----- 332

 Worm   382 VDVHSGLEGGSYLVRQQTTSNDNDHLLENEVSDPTSSSELNIPSSEELTVPTSI 435
                        |.:....|:|.|     |.||   ||:    |.||:||.|.:
Zfish   333 ------------LSQHDAGSSDYD-----ERSD---SSD----SEEEVTVETVV 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C18B12.4	NP_510498.1	PA	<74..176	CDD:333703	22/103 (21%)
		HRD1	<223..>335	CDD:227568	46/112 (41%)
		RING-H2_RNF103	246..291	CDD:319387	26/44 (59%)
rnf13	NP_957338.1	PA_C_RZF_like	23..180	CDD:239038	28/128 (22%)
		zf-RING_2	238..282	CDD:290367	25/43 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	74	1.000	Domainoid score	I6493
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	141	1.000	Inparanoid score	I3514
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		otm12347
orthoMCL	1	0.900	-	-		OOG6_103040
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1776
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.890