DRSC/TRiP Functional Genomics Resources

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Protein Alignment C18B12.4 and Rnf167

DIOPT Version :9

Sequence 1:NP_510498.1 Gene:C18B12.4 / 181600 WormBaseID:WBGene00007666 Length:456 Species:Caenorhabditis elegans
Sequence 2:NP_081721.1 Gene:Rnf167 / 70510 MGIID:1917760 Length:347 Species:Mus musculus


Alignment Length:282 Identity:89/282 - (31%)
Similarity:135/282 - (47%) Gaps:26/282 - (9%)


- Green bases have known domain annotations that are detailed below.


 Worm    52 NFGMDVSDF------IISEENL-GCGVGVEPVDACGPVRIAQNHTTRCHNLFAFVSRSNISHPCK 109
            |..||.:|.      .:|:|.| |..|...|.:||||:....:.........|.:.|.:    |.
Mouse    33 NASMDFADLPALFGATLSDEGLQGFLVEAHPENACGPIAPPPSAPVNGSVFIALLRRFD----CN 93

 Worm   110 FSHQAFMVQNSTYPFRLVIFYNYPGQEPISM--EGTELRDKVNIPVLMISHACKEEIAKKFSDTA 172
            |..:....|.:.|...:|  :|....|.::|  ...|::.::.||.:.|.....|.:...|....
Mouse    94 FDLKVLNAQKAGYGAAVV--HNVNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYLRALFVYEK 156

 Worm   173 GYRLRVRIDPGYYELFRYLIPFLVVI---VFCFALFLITLCVRGCVERRKLNKRRLSKRNLKKIP 234
            |.|: :.:....:.|..|||||..::   |......||..|::   .|::|.:.||:|..||:||
Mouse   157 GARV-LLVPDNSFPLGYYLIPFTGIVGLLVLAMGTVLIVRCIQ---HRKRLQRNRLTKEQLKQIP 217

 Worm   235 VKKYRLGDDPDTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLCKRKIGT---DS 296
            ...|:.||:.|.|||||:.:..|:|||.|||.|.:|..|:|.|||||||.||:||:.:..   |.
Mouse   218 THDYQKGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDE 282

 Worm   297 DSECSTNDLASTSQG-PNDATA 317
            :.|..|.:.....:| |.|..|
Mouse   283 EQEEETQEQEEGDEGEPRDQPA 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C18B12.4NP_510498.1 PA <74..176 CDD:333703 22/103 (21%)
HRD1 <223..>335 CDD:227568 45/99 (45%)
RING-H2_RNF103 246..291 CDD:319387 27/44 (61%)
Rnf167NP_081721.1 PA_C_RZF_like 20..170 CDD:239038 32/143 (22%)
zf-RING_2 228..272 CDD:290367 26/43 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..347 9/34 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 75 1.000 Domainoid score I6375
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41046
Inparanoid 1 1.050 139 1.000 Inparanoid score I3518
Isobase 1 0.950 - 0 Normalized mean entropy S4419
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - otm16836
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X670
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.670

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