DRSC/TRiP Functional Genomics Resources

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Protein Alignment C18B12.4 and gzl

DIOPT Version :10

Sequence 1:NP_510498.1 Gene:C18B12.4 / 181600 WormBaseID:WBGene00007666 Length:456 Species:Caenorhabditis elegans
Sequence 2:NP_649653.1 Gene:gzl / 40791 FlyBaseID:FBgn0037442 Length:536 Species:Drosophila melanogaster


Alignment Length:450 Identity:112/450 - (24%)
Similarity:178/450 - (39%) Gaps:137/450 - (30%)


- Green bases have known domain annotations that are detailed below.


 Worm    97 AFVSRSNISHPCKFSHQAFMVQNSTYPFRLVIFYNYPGQEPISMEGTELRDKVNIPVLMISHACK 161
            |.|:|..    |.|..:..:.||::|  ..||.||..|.:...|....:.. :.||.:.:.|...
  Fly    91 ALVARGE----CVFERKIRVAQNASY--SAVIVYNNEGDDLEQMSAENITG-IRIPSVFVGHTTG 148

 Worm   162 EEIAKKF--------SDTAGYRLRVRIDPGYYELFRYLIPFLVVIVFCF---ALFLITLCVRGCV 215
            :.:|..|        :|...:.:..::          ::||.::|..||   .:::|..|:|   
  Fly   149 KALATYFTTEVVLIINDELPFNINTQL----------ILPFSILIGMCFIIMVIYMIYKCIR--- 200

 Worm   216 ERRKLNKRRLSKRNLKKIPVKKY---RLGDDPDTCAICLESFASGEKLRHLPCRHVFHCNCIDVW 277
            |:|:|.:.||.|..|||:||.:|   ...:..|||.||||.|...:|||.|||.|.:|.:|||.|
  Fly   201 EQRRLRRHRLPKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPW 265

 Worm   278 LTQTRKICPLCKRKIGTDSDSECSTN---DLASTSQGPNDATALYNNADNQSGFELPVPQGQMVD 339
            ||:.|::||:||||:.|..::..|.:   .|.:.:...:|.|.|... ...:|.::    ||:..
  Fly   266 LTENRRVCPICKRKVFTKGEARASRSRQPSLDNVTDTDDDTTPLLQQ-QQSNGRQV----GQVSS 325

 Worm   340 LWSSQEALVDQDIVL---------HNTTRRSITGFVRNAFRKLRNSPRHRDVDVHSGLEGGSYLV 395
            ..|:..|......|.         |.|.||...|  ||.|.:.::|      |..:.|...:  |
  Fly   326 ASSAGGAAGSSSSVAAAAVAGTTRHGTFRRGHAG--RNPFEESQSS------DDENALLAST--V 380

 Worm   396 RQQTTSNDND-------------HLLEN------------------------------------- 410
            |..|:|..::             ||.|.                                     
  Fly   381 RPATSSGAHERINPFDRAPNLPAHLAEQLTESRRSVWSRINFASFFRRQPAVISVAAPPYLERVE 445

 Worm   411 --------------EVSDPTSSSELN------------IPSSEELTVPTSISTHSLDTAT 444
                          .|:.|.|::.||            :|....:..|.:|||.:.|:||
  Fly   446 SGTSAMGLPVTGTIAVASPASNNILNPNLSGSFKDEDDMPPHRSIYEPIAISTPAADSAT 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C18B12.4NP_510498.1 PA <74..176 CDD:333703 20/86 (23%)
HRD1 <223..>335 CDD:227568 45/117 (38%)
RING-H2_RNF103 242..295 CDD:438136 29/52 (56%)
gzlNP_649653.1 PA_C_RZF_like 14..171 CDD:239038 20/86 (23%)
RING-H2_RNF13-like 233..278 CDD:438327 26/44 (59%)

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