Protein Alignment C18B12.4 and rnf167

DIOPT Version :9

• Sequence 1: NP_510498.1
• Gene: C18B12.4 / 181600
• WormBaseID: WBGene00007666
• Length: 456
• Species: Caenorhabditis elegans
• Sequence 2: XP_005165694.2
• Gene: rnf167 / 101055497
• ZFINID: ZDB-GENE-110126-2
• Length: 401
• Species: Danio rerio
• Alignment Length: 453
• Identity: 119/453 - (26%)
• Similarity: 184/453 - (40%)
• Gaps: 96/453 - (21%)

 Worm     8 VVQSVGLLVLFGIYQCNAQYVVDVMRMTSFGEEE---LVHKCLAKGGNFGMDVSDFIISEENLGC 69
            :|.|.|...::..|.          .|||...|:   |....|.|.|..|:.:.
Zfish    20 LVPSPGQAYIYAHYS----------NMTSMLFEDLPALFGSALPKDGLMGVLIE----------- 63

 Worm    70 GVGVEPVDACGPV--------RIAQNHTTRCHNLFAFVSRSNISHPCKFSHQAFMVQNSTYPFRL 126
               ..|.:||.|:        ....|.||:   ....:.|    :.|.|..:.:..|.:.|...:
Zfish    64 ---ARPQNACTPIDPPPASPTPADPNSTTK---YIVLIRR----YDCNFDVKVYHAQQAGYSAAI 118

 Worm   127 VIFYNYPGQEPISM--EGTELRDKVNIPVLMISHACKEEIAKKFSDTAGYRLRVRIDPGY-YELF 188
            |  :|......::|  ....:.::::||.:..|....:.:.|...:...|   |.:.|.: :.|.
Zfish   119 V--HNMYSNSLLNMGYSNETIAEEISIPSVFTSFFASQMLHKIIPEKGAY---VVLKPEFSFPLS 178

 Worm   189 RYLIPFLVVIVFCFALFLITLCVRGCVERRK-LNKRRLSKRNLKKIPVKKYRLGDDPDTCAICLE 252
            .|||||..|:.....:.:|.:.|| ||:.|| |.|.||||..|||||:.|:..||..|.|||||:
Zfish   179 YYLIPFTGVVCMIIIVMVIIMIVR-CVQHRKRLRKNRLSKEQLKKIPIHKFNKGDSYDVCAICLD 242

 Worm   253 SFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLCKRKIGTDSDSECSTNDLASTSQGPNDATA 317
            .:..|:|||.|||.|.:|..|:|.|||||:|.||:||::: |..:.|.|.:..:....||:||
Zfish   243 EYEEGDKLRVLPCSHAYHSRCVDPWLTQTKKTCPVCKQRV-TRPNPEYSESSDSDEEAGPHDA-- 304

 Worm   318 LYNNADNQSGFELPVPQGQMVDLWSSQEALVDQDIVLHNTTRRSITGFVRNAFRKLRNSPRHRDV 382
              ...|.::....|...|....  ||...       .:::|..|....|..|.:.|.::|:|
Zfish   305 --EEEDERTPLLRPSNPGSPAS--SSPPP-------SYSSTVASEPATVTTAAQCLPHTPQH--- 355

 Worm   383 DVHSGLEGGSYLVRQQTTSNDNDHLLENEVSDPTSSSELNIPSSEELTVPTSISTHSLDTATT 445
                                |...|..:|...|...|:......||       ..|:.::.||
Zfish   356 --------------------DAPLLANDEYYSPIEDSDDEGSEDEE-------EGHASESDTT 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C18B12.4	NP_510498.1	PA	<74..176	CDD:333703	20/111 (18%)
		HRD1	<223..>335	CDD:227568	48/111 (43%)
		RING-H2_RNF103	246..291	CDD:319387	26/44 (59%)
rnf167	XP_005165694.2	PA_C_RZF_like	14..177	CDD:239038	35/192 (18%)
		RING-H2_RNF167	235..280	CDD:319711	26/44 (59%)
		RING-H2 finger (C3H2C3-type)	237..278	CDD:319711	24/40 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	74	1.000	Domainoid score	I6493
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H41046
Inparanoid	1	1.050	141	1.000	Inparanoid score	I3514
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		otm12347
orthoMCL	1	0.900	-	-		OOG6_103040
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.860