DRSC/TRiP Functional Genomics Resources

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Protein Alignment erd-2.1 and KdelR

DIOPT Version :9

Sequence 1:NP_001366716.1 Gene:erd-2.1 / 181228 WormBaseID:WBGene00001331 Length:213 Species:Caenorhabditis elegans
Sequence 2:NP_477296.1 Gene:KdelR / 34427 FlyBaseID:FBgn0267330 Length:212 Species:Drosophila melanogaster


Alignment Length:207 Identity:139/207 - (67%)
Similarity:177/207 - (85%) Gaps:0/207 - (0%)


- Green bases have known domain annotations that are detailed below.


 Worm     1 MNLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKI 65
            ||:|||..|::|..||::|||||||:|||.||||:||:|||:|::||||||||.:.|.||:.||:
  Fly     1 MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKV 65

 Worm    66 FYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEFIFMEVMWTFSIYLEAVA 130
            .:|..|..|||||:.|||||||.|:||||||||::|..:|:|:|||||..|||:||||||||:||
  Fly    66 LFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYLESVA 130

 Worm   131 IMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWVYRYYTESFFDPISVVAGIVQTVLYADFF 195
            |:||||::||||.||:||:||||||||||.||:|||||||..||.:|.|::.||:||||||.|||
  Fly   131 ILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGVVQTVLYCDFF 195

 Worm   196 YLYITRVIQSNR 207
            |||||:|::..:
  Fly   196 YLYITKVLKGKK 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
erd-2.1NP_001366716.1 ER_lumen_recept 28..169 CDD:395652 98/140 (70%)
KdelRNP_477296.1 ER_lumen_recept 28..169 CDD:395652 98/140 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158918
Domainoid 1 1.000 219 1.000 Domainoid score I1521
eggNOG 1 0.900 - - E1_COG5196
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 307 1.000 Inparanoid score I1578
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53919
OrthoDB 1 1.010 - - D1186269at2759
OrthoFinder 1 1.000 - - FOG0000906
OrthoInspector 1 1.000 - - oto19681
orthoMCL 1 0.900 - - OOG6_101087
Panther 1 1.100 - - O PTHR10585
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R403
SonicParanoid 1 1.000 - - X521
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.800

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