DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DRD1 and 5-HT1A

DIOPT Version :10

Sequence 1:NP_000785.1 Gene:DRD1 / 1812 HGNCID:3020 Length:446 Species:Homo sapiens
Sequence 2:NP_001356890.1 Gene:5-HT1A / 37196 FlyBaseID:FBgn0004168 Length:846 Species:Drosophila melanogaster


Alignment Length:636 Identity:135/636 - (21%)
Similarity:204/636 - (32%) Gaps:316/636 - (49%)


- Green bases have known domain annotations that are detailed below.


Human     9 MDGTG-------LVVERDFSVRI---LTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFV 63
            ::|||       .|.|.||:..:   :|:..|.|:||.|::||..|.||:|..|:|:: |.|:.|
  Fly   202 INGTGGLNVTTSKVAEDDFTQLLRMAVTSVLLGLMILVTIIGNVFVIAAIILERNLQN-VANYLV 265

Human    64 ISLAVSDLLVAVLVMPWKAVAEIAGFWPFG-SFCNIWVAFDIMCSTASILNLCVISVDRYWAISS 127
            .||||:||.||.||||..||.||:..|..| ..|:||.:.|::|.|||||:|..|:||||||:::
  Fly   266 ASLAVADLFVACLVMPLGAVYEISQGWILGPELCDIWTSCDVLCCTASILHLVAIAVDRYWAVTN 330

Human   128 PFRYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTSPSDGNATSLAETIDNCDSSLSR 192
             ..|....|....|::|...||.:|::|..| |..|        .|.:.....|. ..|..|...
  Fly   331 -IDYIHSRTSNRVFMMIFCVWTAAVIVSLAP-QFGW--------KDPDYLQRIEQ-QKCMVSQDV 384

Human   193 TYAISSSVISFYIPVAIMIVTYTRIYRIAQKQIRR------------------------------ 227
            :|.:.::..:||:|:.:::..|.:||:.|:|:|.|                              
  Fly   385 SYQVFATCCTFYVPLLVILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGAATDTKLHRLRL 449

Human   228 ---------------------------------------------------IAALERAAVHAKN- 240
                                                               :.:..||.|.|.: 
  Fly   450 RLGRFSTAKSKTGSAVGVSGPASGGRALGLVDGNSTNTVNTVEDTEFSSSNVDSKSRAGVEAPST 514

Human   241 ----------------------------------------------------------------- 240
                                                                             
  Fly   515 SGNQIATVSHLVALAKQQGKSTAKSSAAVNGMAPSGRQEDDGQRPEHGEQEDREELEDQDEQVGP 579

Human   241 --------------------C-------------------------------------------- 241
                                |                                            
  Fly   580 QPTTATSAMTAAGTNESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTIT 644

Human   242 -------QTTTGNGKPV----------------ECSQ--------------PESSFK-------- 261
                   ||.|..|..:                .|:|              ||...:        
  Fly   645 SISALSPQTPTSQGVGIAAAAAGPMTAKTSTLTSCNQSHPLCGTANESPSTPEPRSRQPTTPQQQ 709

Human   262 -------------------------------MSFKRETKVLKTLSVIMGVFVCCWLPFFILNCIL 295
                                           :..|||.|..|||::|.|.||.||||||::...:
  Fly   710 PHQQAHQQQQQQQQLSSIANPMQKVNKRKETLEAKRERKAAKTLAIITGAFVVCWLPFFVMALTM 774

Human   296 PFCGSGETQPFCIDSNTFDVFVWFGWANSSLNPIIYA-FNADFRKAFSTLL 345
            |.|.:.:     |..:...:|:|.|:.||:|||:||. |:.:||:||..:|
  Fly   775 PLCAACQ-----ISDSVASLFLWLGYFNSTLNPVIYTIFSPEFRQAFKRIL 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DRD1NP_000785.1 7tmA_D1A_dopamine_R 23..341 CDD:320443 125/609 (21%)
TM helix 1 25..51 CDD:320443 12/25 (48%)
TM helix 2 59..86 CDD:320443 16/26 (62%)
TM helix 3 96..126 CDD:320443 18/29 (62%)
TM helix 4 138..161 CDD:320443 7/22 (32%)
TM helix 5 191..221 CDD:320443 7/29 (24%)
TM helix 6 265..295 CDD:320443 17/29 (59%)
TM helix 7 310..335 CDD:320443 11/25 (44%)
5-HT1ANP_001356890.1 7tmA_5-HT1A_invertebrates 227..>413 CDD:320454 75/197 (38%)
TM helix 1 228..254 CDD:320454 12/25 (48%)
TM helix 2 261..287 CDD:320454 16/25 (64%)
TM helix 3 299..329 CDD:320454 18/29 (62%)
TM helix 4 340..362 CDD:320454 7/22 (32%)
TM helix 5 383..412 CDD:320454 7/28 (25%)
7tm_GPCRs <743..816 CDD:475119 33/77 (43%)
TM helix 6 750..772 CDD:410628 13/21 (62%)
TM helix 7 784..809 CDD:410628 10/24 (42%)

Return to query results.
Submit another query.