DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmbr and CCHa1-R

DIOPT Version :9

Sequence 1:NP_032729.1 Gene:Nmbr / 18101 MGIID:1100525 Length:390 Species:Mus musculus
Sequence 2:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster


Alignment Length:415 Identity:147/415 - (35%)
Similarity:219/415 - (52%) Gaps:58/415 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 NESELVPEVWEKDFLPDSDGTTAELVIRCVIPSLYLIIISVGLLGNIMLVKIFLTNSAMRNVPNI 80
            |.||||  ..|..::|  .|...|..|   :|.|:.:|..||:|||..|:.:||:...||||||.
  Fly    61 NFSELV--TTETPYVP--YGRRPETYI---VPILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNT 118

Mouse    81 FISNLAAGDLLLLLTCVPVDASRYFFDEWVFGKLGCKLIPAIQLTSVGVSVFTLTALSADRYRAI 145
            :|.:||..|||:::|.||:.::.|..:.|.:|...|.|...::..|:|||||||||||.|||.||
  Fly   119 YILSLALADLLVIITTVPLASTVYTVEYWPYGSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAI 183

Mouse   146 VNPM-DMQTSG----VLLWTSLKAVGIWVVSVLLAVPEAVFSEVARIGSLDNSSFTACIPYPQTD 205
            |:|: .....|    ....|...||.||::::|..:|..:.|.:..:| ::..|...|.|||:..
  Fly   184 VDPLRKFHAHGGGRRATRMTLATAVSIWLLAILCGLPALIGSNLKHLG-INEKSIVICYPYPEEW 247

Mouse   206 EL-HPKIHSVLIFLVYFLIPLVIISIYYYHIAKTLIKSAHNLPGEYNEHTKKQMETRKRLAKIVL 269
            .: :.|...:|.||||:.||||:|:::|..||..|:.|| ::|||. :...:|:..|:::|..||
  Fly   248 GINYAKSMVLLHFLVYYAIPLVVIAVFYVLIALHLMYSA-SVPGEI-QGAVRQVRARRKVAVTVL 310

Mouse   270 VFVGCFVFCWFPNHVLYLYRSF------NYKEIDPSLGHMIVTLVARVLSFSNSCVNPFALYLLS 328
            .||..|..|:.|.||.:|:..|      :|.    :..| ::.:||..:||:|||.||.|||.:|
  Fly   311 AFVVIFGICFLPYHVFFLWFYFWPTAQDDYN----AFWH-VLRIVAYCMSFANSCANPVALYFVS 370

Mouse   329 ESFRKHFNSQLCC----GR-----------------------KSYPERSTSYLLSSSAVRMTSLK 366
            .:||||||..|.|    ||                       |.:..|.:.|   .|.:|...|:
  Fly   371 GAFRKHFNRYLFCRGASGRRKKRGQHDTFCMHRDTSLTSTASKRFQSRHSCY---QSTIRSCRLQ 432

Mouse   367 SNTKNVVTNSVLLNG-HSTKQEIAL 390
            ..|...:.|....|| :.:..|:||
  Fly   433 ETTITTLPNGGNQNGANISAVELAL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmbrNP_032729.1 7tm_1 60..322 CDD:278431 103/273 (38%)
CCHa1-RNP_611241.2 7tm_4 88..>188 CDD:304433 48/99 (48%)
7tm_1 98..364 CDD:278431 103/273 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 178 1.000 Domainoid score I3534
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20560
Inparanoid 1 1.050 225 1.000 Inparanoid score I3485
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001846
OrthoInspector 1 1.000 - - mtm8893
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45695
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4897
SonicParanoid 1 1.000 - - X1046
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.090

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