DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nkx2-5 and HGTX

DIOPT Version :9

Sequence 1:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:187 Identity:51/187 - (27%)
Similarity:86/187 - (45%) Gaps:20/187 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 PTPFSVKDILNLEQQQRSLASGDLSARLEATLAPASCMLAAFKPEAYSGPEAAASGLAELRAEMG 73
            |.|..:..||:   :...:.|..|||...|.:...|.             .|||:|:|:..::..
  Fly   358 PNPHGIDTILS---KPPPVTSAGLSALTGAGIPRFSI-------------AAAAAGMAQYLSQSQ 406

Mouse    74 PAPSPPKCSPAFPAAPTFYPGAYGDPDPAKDPRADKKELCALQKAVELDKAETDGAERPRARRRR 138
            .||..............::||..|   ...:|.|.::.|.....| .|.::........:..:::
  Fly   407 GAPLKTHAGHIVDRTHLYWPGLQG---LVANPIAWRERLSNTMSA-NLSQSHQHHPSNDKDGKKK 467

Mouse   139 KPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQ 195
            ..|..||..|::.||:.|:|.:||:.|||.:||..|.::.:|||:||||||.|.:::
  Fly   468 HTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKR 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nkx2-5NP_032726.1 Homeobox 144..194 CDD:365835 25/49 (51%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 9/32 (28%)
Homeobox 469..523 CDD:395001 26/53 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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