DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nkx2-5 and lbe

DIOPT Version :10

Sequence 1:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus
Sequence 2:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster


Alignment Length:320 Identity:77/320 - (24%)
Similarity:116/320 - (36%) Gaps:138/320 - (43%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 PS-PALTPTP---------------FSVKDILNLEQQQRSLASGDLSARLEATLAPASCMLAAFK 51
            || |:..|.|               ||:.|||...::||.          |:...|.:..|.|  
  Fly   109 PSPPSAVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQRE----------ESVSPPPNANLLA-- 161

Mouse    52 PEAYSGPEAAASGLAELRAE---MGPA--------------PSPPKCSPAFPAAPTFYPGA---- 95
            |.| |.|.|.:.||.:.|.|   :.||              |......|..|..| |.|.|    
  Fly   162 PPA-SRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRP-FIPSALLHY 224

Mouse    96 ------------------------YGDPDPA----KDPRADKK----------ELCALQKAVELD 122
                                    :...:||    :|..:::.          |.|:.::|.:|:
  Fly   225 EQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLE 289

Mouse   123 KAET-DGAE------------------------------------------------RPRARRRR 138
            |..| :|:|                                                ||:.:::|
  Fly   290 KLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKR 354

Mouse   139 KPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQD 198
            |.|..|:..|::|||:||..|:|||..:||::|:.|.|::.||..||||||.|.||..::
  Fly   355 KSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEE 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nkx2-5NP_032726.1 Homeodomain 144..194 CDD:459649 25/49 (51%)
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)

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