DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nkx2-5 and tin

DIOPT Version :10

Sequence 1:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus
Sequence 2:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster


Alignment Length:374 Identity:94/374 - (25%)
Similarity:120/374 - (32%) Gaps:175/374 - (46%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 PSP-------ALTPTPFSVKDILNLEQQQRSL--ASGDLSARLEATLAPASCMLAAFKPEAYSGP 58
            |||       ||..||||||||||:..|..:.  :.|.:..     .|.||.:.||.:   |..|
  Fly    22 PSPGSLTNADALNTTPFSVKDILNMVNQTEAYEGSYGHIDG-----AATASALFAAGE---YQNP 78

Mouse    59 EAAASGLAELRAEMGPAP--------------SPPKCSPAFPAAP-------------------- 89
            ....:.....::|: |.|              :....||..|..|                    
  Fly    79 HQYLNHQQHQQSEL-PIPQQQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMPAHMFQHH 142

Mouse    90 --------------------TFYPGA--------------------------------------- 95
                                .||.||                                       
  Fly   143 HGHPHQSFQHSASAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPT 207

Mouse    96 -YGDPDPAKD---------PRADKKELC-----------------------------------AL 115
             |..|.|..|         .:|..::||                                   ..
  Fly   208 PYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVT 272

Mouse   116 QKAVELDKAETDGAERP-------RARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASV 173
            ....||.|....|...|       :.|.:||||||||||||.|||.||:.::||:..||:.:|..
  Fly   273 SSRSELRKNSISGNSNPGSNSGSTKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQK 337

Mouse   174 LKLTSTQVKIWFQNRRYKCKRQRQD-----QTLELLGPP-------PPP 210
            |.|::|||||||||||||.||...|     :.|:|...|       |||
  Fly   338 LNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHLKLKSEPLDSPTSLPPP 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nkx2-5NP_032726.1 Homeodomain 144..194 CDD:459649 31/49 (63%)
tinNP_524433.1 Homeodomain 302..358 CDD:459649 37/55 (67%)

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