DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nkx2-5 and Antp

DIOPT Version :10

Sequence 1:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:205 Identity:44/205 - (21%)
Similarity:72/205 - (35%) Gaps:61/205 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 PSPALTPTPFSVKDILNLEQQQRSLASGDLSARLEATLAPASCMLAAFKPEAYSGPEAAASGLAE 67
            |...|..|...|.|:..:.|...::......:.:....||...|                     
  Fly   204 PQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGM--------------------- 247

Mouse    68 LRAEMGPAPSPPKCSPAFPAAPTFYPGAYGDPDPAKDPRADKKELCALQKAVELDKAETDGAERP 132
                |.....||:.....|...|         .|:::|                 .:::.|...|
  Fly   248 ----MHQGQGPPQMHQGHPGQHT---------PPSQNP-----------------NSQSSGMPSP 282

Mouse   133 ----------RARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQN 187
                      :.:.|::.|..:::.|..|||:.|...|||:...|.::|..|.||..|:||||||
  Fly   283 LYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 347

Mouse   188 RRYKCKRQRQ 197
            ||.|.|::.:
  Fly   348 RRMKWKKENK 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nkx2-5NP_032726.1 Homeodomain 144..194 CDD:459649 23/49 (47%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 20/152 (13%)
Homeodomain 298..354 CDD:459649 24/55 (44%)

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