DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nkx2-5 and Dfd

DIOPT Version :10

Sequence 1:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:271 Identity:66/271 - (24%)
Similarity:108/271 - (39%) Gaps:87/271 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse    97 GDPDPAKDPRAD----KKELCALQKAVELDKAETDGAERPRARRRRKPRVLFSQAQVYELERRFK 157
            ||.|..:|..|:    ::.:....|.:.: ....:|:.:|....:|: |..:::.|:.|||:.|.
  Fly   324 GDSDSDEDLMAETTDGERIIYPWMKKIHV-AGVANGSYQPGMEPKRQ-RTAYTRHQILELEKEFH 386

Mouse   158 QQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQR--------QDQTLELLGPPPP----P 210
            ..|||:...|.::|..|.|:..|:||||||||.|.|:..        :.:|::..|.|.|    |
  Fly   387 YNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKP 451

Mouse   211 ARRIA--------------------VPVL---VR-DGKPCLGDPAAYAPAYGVGLNAYGYNAYPY 251
            .:|.|                    .||:   :| |....:||.::                   
  Fly   452 TKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESIGDVSS------------------- 497

Mouse   252 PSYGGAACSPGYSCAAYPAAP------PAAQPPAASANSNFVNFGVGDLNTVQSPGMPQGNS--- 307
             |.|    :|.|    .||||      |.:|...::.|:|    |.|:.|...:......|:   
  Fly   498 -SLG----NPPY----IPAAPETTSSYPGSQQHLSNNNNN----GSGNNNNNNNNNNSNLNNNNN 549

Mouse   308 ----GVSTLHG 314
                |.:.|||
  Fly   550 NNQMGHTNLHG 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nkx2-5NP_032726.1 Homeodomain 144..194 CDD:459649 22/49 (45%)
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 24/56 (43%)

Return to query results.
Submit another query.