DRSC/TRiP Functional Genomics Resources

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Protein Alignment hsp-3 and Hsc70-4

DIOPT Version :9

Sequence 1:NP_001370435.1 Gene:hsp-3 / 180880 WormBaseID:WBGene00002007 Length:661 Species:Caenorhabditis elegans
Sequence 2:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster


Alignment Length:617 Identity:383/617 - (62%)
Similarity:494/617 - (80%) Gaps:8/617 - (1%)


- Green bases have known domain annotations that are detailed below.


 Worm    36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFD 100
            :|||||||||||||:::|:|||||||||||.|||||||:  ..:||||||||||:.:||..||||
  Fly     7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPTQTIFD 69

 Worm   101 AKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESY 165
            |||||||.::|..||:|:|||||:|:....||.:||....:.|.|.|||:|:|||.||||.||:|
  Fly    70 AKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAY 134

 Worm   166 LGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKD-GERNILVFD 229
            |||.|.|||:||||||||:||||||||||||||||:||||||||||||||||||. ||||:|:||
  Fly   135 LGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFD 199

 Worm   230 LGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKLR 294
            |||||||||:|:||:|:|||.:|.|||||||||||.|::.:|::.:|:|..|||..:|||:::||
  Fly   200 LGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLR 264

 Worm   295 REVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKD 359
            ...|:|||.||:..|..:||:|||:|.||..::|||:|||||.||||:|:.||:|.|.|:.|.|.
  Fly   265 TACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKS 329

 Worm   360 DVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLL 422
            .:|:||||||||||||||:|:::.|||||.::.||||||||||||||..::.|:  ::..:::||
  Fly   330 VIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLL 394

 Worm   423 DVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKF 487
            ||.||::||||.||||:.||.|||.||||::|.|:|.:||||.|.|||:||||.|||||:.||||
  Fly   395 DVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKF 459

 Worm   488 DLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDAEK 552
            :|:|:||||||||||||||:||.||||:|||.::.|..:||||||||:.|||.||||||:|:|||
  Fly   460 ELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNEAEK 524

 Worm   553 FAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEAS 617
            :..:|:|.|:...|:|.||||.:|:|..: |::.|..|:.:.|:.||.:...|.|.||.:|..|.
  Fly   525 YRNEDEKQKETIAAKNGLESYCFNMKATL-DEDNLKTKISDSDRTTILDKCNETIKWLDANQLAD 588

 Worm   618 AEELKEQKKDLESKVQPIVSKLYKDAG--AGG 647
            .||.:.::|:||....||::|||:.||  .||
  Fly   589 KEEYEHRQKELEGVCNPIITKLYQGAGFPPGG 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hsp-3NP_001370435.1 PTZ00009 32..648 CDD:240227 383/617 (62%)
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 378/607 (62%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 251/375 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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