DRSC/TRiP Functional Genomics Resources

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Protein Alignment nas-38 and Cubn

DIOPT Version :10

Sequence 1:NP_001359993.1 Gene:nas-38 / 180407 WormBaseID:WBGene00003554 Length:727 Species:Caenorhabditis elegans
Sequence 2:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster


Alignment Length:385 Identity:87/385 - (22%)
Similarity:137/385 - (35%) Gaps:109/385 - (28%)


- Green bases have known domain annotations that are detailed below.


 Worm   213 LGIFHEQARPDQERHIAINYNNIPLSRWNNFQAVGENHAETYNLPYDTGS-VMHYGPY---GFAS 273
            |.||.|....|   ::.| ::...|..|:..:.:       .:||.::.. |.|..||   .|.:
  Fly  2070 LEIFSEDCIAD---YVKI-FSGSDLQNWSELRTL-------CSLPTESSDRVFHGRPYLRVEFVT 2123

 Worm   274 DP---------------------------YTPTIRTLERVQQSTI-------GQRAGPSFLDYQ- 303
            ||                           .|..::.|.|.....:       |:|....|.|:| 
  Fly  2124 DPSVNKTGFNGIVRTACGSEITASKGLVNITEILKVLPRPNHDCVWTIKVRQGRRIKIDFPDFQL 2188

 Worm   304 AINMAYGCTESCADLPCLRNGYTHPNNCSMCACPEGLSGRYCEQVYPSNAQCGG----------- 357
            ..|||.|.:: |.:...||||....:       |....|:|||.|.........           
  Fly  2189 QNNMASGSSD-CRNYLLLRNGNDEDS-------PFLGRGKYCEDVVHEVLNTSSNKAYIKFHFAS 2245

 Worm   358 -----VIFATKEVKY----------------ITSPNYPDKFPIDTECNWIIAAPIEGRVFMEFEG 401
                 |.|..:|::|                |:||.||......:||.||:.||.|.|:.:.|:|
  Fly  2246 PPRFLVSFRFEELRYTDSGRIRLSASGDEQFISSPYYPHLPHPHSECIWIVEAPPEHRIMLHFQG 2310

 Worm   402 DFDFLC----EDTCDKAYVEVKYHS-DKRLTGARYCCSLLPKNRFISFKNEMII-----IMRGYR 456
            .||.|.    .:.|.:.:|.:...| :.|....|||.:..| :...|..|:|.|     :...:.
  Fly  2311 AFDMLDATGEPEECQREFVLINDGSTELRPEIGRYCGNRKP-DTIYSTGNQMRIRYFTDVSEPHM 2374

 Worm   457 SSGAGFK-AKFWSNLGEPEGV-STP------LPPTTAPLPEISETTQKPEPTTVQSTTTY 508
            ...|... |:...:...|||| ::|      :......|.|...|.:..:.:|:..|:.|
  Fly  2375 GFNASLSVARCGGSFHSPEGVIASPSRDLLLIHEEGKQLQECVYTIELEKGSTIDLTSEY 2434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nas-38NP_001359993.1 Astacin 122..313 CDD:426242 29/138 (21%)
CUB 367..466 CDD:214483 33/125 (26%)
TSP1 613..658 CDD:214559
CubnNP_727348.2 cubilin_NTD 21..149 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_CA 324..367 CDD:214542
EGF 430..457 CDD:394967
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:412131
CUB 853..970 CDD:238001
CUB 978..1094 CDD:238001
CUB 1100..1211 CDD:238001
CUB 1216..1330 CDD:238001
CUB 1446..1549 CDD:238001
CUB 1554..1667 CDD:238001
CUB 1792..1899 CDD:238001
CUB 1910..1998 CDD:412131
CUB 2019..2133 CDD:238001 17/73 (23%)
CUB 2140..2242 CDD:238001 23/109 (21%)
CUB 2263..2379 CDD:238001 30/116 (26%)
CUB 2385..2511 CDD:238001 11/50 (22%)
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:412131
CUB 2898..3008 CDD:238001
CUB 3011..3127 CDD:238001
CUB 3130..3241 CDD:238001
CUB 3254..3363 CDD:238001
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:412131
CUB 3623..3733 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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