DRSC/TRiP Functional Genomics Resources

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Protein Alignment hmit-1.2 and CG33282

DIOPT Version :9

Sequence 1:NP_507624.1 Gene:hmit-1.2 / 180206 WormBaseID:WBGene00013074 Length:613 Species:Caenorhabditis elegans
Sequence 2:NP_001097067.1 Gene:CG33282 / 2768939 FlyBaseID:FBgn0053282 Length:460 Species:Drosophila melanogaster


Alignment Length:502 Identity:97/502 - (19%)
Similarity:176/502 - (35%) Gaps:148/502 - (29%)


- Green bases have known domain annotations that are detailed below.


 Worm    91 DRYGRKPIIIGSTLIFVCGAVICAVAWTKI-------VMLIGRIFLGVGIGFASMVVPVYLGEAS 148
            :|.|||     ..|..:.|...|  .|..|       .:...|...|...|...:|||:::.|.:
  Fly    84 ERAGRK-----FCLYLMAGPYAC--IWILIYCASNVYYLYAARFLCGFTGGAGYLVVPIFISEVA 141

 Worm   149 PTHVRGTLVSAFAMMISFGQVVANIMGGVFSYWEPYTIGWRLMFAFAGIPALIQFVCFIFLPETP 213
            .:::||.|.|...:.:..|.:...|:....:|        .::...|.|..:..|:..|.||||.
  Fly   142 DSNIRGALTSMVMLSVDLGILAGYILSTYLAY--------HVVPFLAIILPVAYFIANIMLPETA 198

 Worm   214 RWLYENGHTEQAEQVLEKIYGGN--------TEWIEYELAEIKTYAEERQKQMEEEKKSGPVIWR 270
            .:|.:......||....  |..|        |..:.:|  |::|....:|     .:.:.|:.::
  Fly   199 PYLLKKSQLAAAENSFR--YYRNQRSAICEQTSKVNFE--ELRTAVLSQQ-----TRNATPLSYK 254

 Worm   271 ILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSAG-IENYHTIIWISVILSICNLIGPF 334
            .|.|...||......:|....|.:|:.:.:.|.:||.:::| :.:.:|   .::|:.:..::|.:
  Fly   255 DLTTKPALKGFAASIVLSLGYQFSGVFSFINYMSDIFKASGSVVDVNT---ATIIIGLVQIVGVY 316

 Worm   335 APMFFIEKLGRRKLFLFSCAGVVVSLVLIGVSFLLVGNDSAPNFDRSAYLLAGNYQSNGEAESCL 399
            .....::.:|||.|.|.|..||.:..:..|....|     |..:|.|                  
  Fly   317 TSTILVDIVGRRVLMLISTMGVGIGCIAFGCFTYL-----AKIYDLS------------------ 358

 Worm   400 MLSNCDSCVTSEHCGFCEDSETRTGFCLPVDHNDVTLYSSTGLCTNGLDKSNSSFPNATSYVWQK 464
                                          |.|                             |  
  Fly   359 ------------------------------DFN-----------------------------W-- 362

 Worm   465 HHCTTSYTILPIVMMGVYLLTFSCGFTSLPWVLNSEFYPMWARSTCVSIST--LSNWVFNLI--- 524
                     ||:|:|.:.....:.|...:.:::..|.:|:..||...|:|.  ||..||..:   
  Fly   363 ---------LPLVLMIIICYVANIGLIGIFFLVLVELFPVKIRSLATSLSVIFLSLLVFGTLKLF 418

 Worm   525 -IALTYLSLTHAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSIDE 570
             :.|.|..::..:      |..|...::.|.:.:..:.||.|.|:.|
  Fly   419 PLMLHYWGISFTM------WFSAASALLTFFYFWLFLQETKGKSMIE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hmit-1.2NP_507624.1 MFS 32..562 CDD:421695 92/492 (19%)
CG33282NP_001097067.1 MFS 21..448 CDD:119392 92/489 (19%)
MFS_1 53..409 CDD:284993 84/444 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158038
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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