DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hmit-1.1 and CG33282

DIOPT Version :9

Sequence 1:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans
Sequence 2:NP_001097067.1 Gene:CG33282 / 2768939 FlyBaseID:FBgn0053282 Length:460 Species:Drosophila melanogaster


Alignment Length:562 Identity:113/562 - (20%)
Similarity:210/562 - (37%) Gaps:143/562 - (25%)


- Green bases have known domain annotations that are detailed below.


 Worm    26 YILAAASVIGGFLFGYDTSV--VSAAMLYMPDAPGLKPMDTVWQEVLVSIS-----PGMAAV-GS 82
            |.|.|..::....||:...|  :|..:..:..|.  .|:|  ::..|..||     .|:.:: |:
  Fly    16 YQLLATVIVNIITFGHGVGVGWLSPTLTKIQTAD--SPLD--FEVNLAQISWLGSMLGLDSLCGN 76

 Worm    83 LMSGTSSDYIGRRKVI-LGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYLGET 146
            |......:..||:..: |.|.....|..|:..|| |...|...|.|.|...|...::||:::.|.
  Fly    77 LTIAMLIERAGRKFCLYLMAGPYACIWILIYCAS-NVYYLYAARFLCGFTGGAGYLVVPIFISEV 140

 Worm   147 APTHVRGMLVAAFALMISFGQVVANITGGAFSY-IDPYNVGWRLMFAFAAVPSIIQFVCFMFLPE 210
            |.:::||.|.:...|.:..|.:...|.....:| :.|:         .|.:..:..|:..:.|||
  Fly   141 ADSNIRGALTSMVMLSVDLGILAGYILSTYLAYHVVPF---------LAIILPVAYFIANIMLPE 196

 Worm   211 TPRWLY--------ENGFETETREVLEKVYNGDKEWVEYEMAEIIAFNE-DQAKENEKAHASGPV 266
            |..:|.        ||.|         :.|...:..: .|....:.|.| ..|..:::...:.|:
  Fly   197 TAPYLLKKSQLAAAENSF---------RYYRNQRSAI-CEQTSKVNFEELRTAVLSQQTRNATPL 251

 Worm   267 IWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSG--ISNNHTTIWISVLLSLCNF 329
            .::.|.|...||......:|....|.:|:.:.:.|.:||.::||  :..|..||    ::.|...
  Fly   252 SYKDLTTKPALKGFAASIVLSLGYQFSGVFSFINYMSDIFKASGSVVDVNTATI----IIGLVQI 312

 Worm   330 IGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFIGVAFLLVNHDSAATLPANQYGSNFNSSYPDAK 394
            :|.:....|::.||||:       |:::|.:.:|:                              
  Fly   313 VGVYTSTILVDIVGRRV-------LMLISTMGVGI------------------------------ 340

 Worm   395 GCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTGSCTNSNGSIANNFKWEKYYC 459
            ||:|:.    |.|..|                      ::|.            .::|.|     
  Fly   341 GCIAFG----CFTYLA----------------------KIYD------------LSDFNW----- 362

 Worm   460 DTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCVAISTTSNWVFNLIIALTYLSL 524
                  ||::...:.....:.|...:.:::..|.:|:..||...::|.    :|..::....|.|
  Fly   363 ------LPLVLMIIICYVANIGLIGIFFLVLVELFPVKIRSLATSLSV----IFLSLLVFGTLKL 417

 Worm   525 TQVIGKYG----AFWLYAGLTVIAFIFILFLVPETKGYSIEE 562
            ..::..|.    ..|..|...::.|.:....:.||||.|:.|
  Fly   418 FPLMLHYWGISFTMWFSAASALLTFFYFWLFLQETKGKSMIE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 104/547 (19%)
CG33282NP_001097067.1 MFS 21..448 CDD:119392 104/544 (19%)
MFS_1 53..409 CDD:284993 92/471 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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