DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment clec-48 and lectin-22C

DIOPT Version :9

Sequence 1:NP_507547.1 Gene:clec-48 / 180188 WormBaseID:WBGene00007565 Length:321 Species:Caenorhabditis elegans
Sequence 2:NP_001137766.1 Gene:lectin-22C / 7354375 FlyBaseID:FBgn0259230 Length:263 Species:Drosophila melanogaster


Alignment Length:91 Identity:24/91 - (26%)
Similarity:41/91 - (45%) Gaps:8/91 - (8%)


- Green bases have known domain annotations that are detailed below.


 Worm    29 QFNRCYQYF--TAPAQFSFAEQQCNLLGGHLASVQNGQENALLQSNAANSFKKSNYSDYWIGAND 91
            |....|.|.  .:...:|.|.:.|..:|||||.:::..:.|.:::|    .|:..:  ||:|.||
  Fly   141 QIGSKYYYIEKVSEKNWSTASKTCRNMGGHLADIKDEADLAAIKAN----LKEDTH--YWLGIND 199

 Worm    92 LETSGTWKWTDPSVTFDYSNWQLGEP 117
            |:..|.:..........:..|..|.|
  Fly   200 LDHEGKFLSMPTGKQTTFLKWASGRP 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clec-48NP_507547.1 CLECT 26..146 CDD:214480 24/91 (26%)
CLECT 182..315 CDD:214480
lectin-22CNP_001137766.1 CLECT 146..255 CDD:153057 23/86 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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