DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurog1 and Fer3

DIOPT Version :9

Sequence 1:NP_035026.1 Gene:Neurog1 / 18014 MGIID:107754 Length:244 Species:Mus musculus
Sequence 2:NP_524322.1 Gene:Fer3 / 41411 FlyBaseID:FBgn0037937 Length:195 Species:Drosophila melanogaster


Alignment Length:161 Identity:54/161 - (33%)
Similarity:76/161 - (47%) Gaps:40/161 - (24%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 PLETCISDLDCSSSNSSSDLSSFLTDEEDCARLQPLASTSGLSVPARRSAPALSGASNVPGAQDE 68
            |.:..|:...|      :|||.:     ..:::.||       ||.|   |:.:|.:|  |:...
  Fly    33 PYQELIAGFPC------TDLSLW-----QRSQVTPL-------VPQR---PSTNGRAN--GSSSS 74

Mouse    69 EQERRRRRGRARVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIE 133
            .::.||     ||.|.|        :|..||.|||.||.|||.|.|.||..:|:|..:.:|::||
  Fly    75 SKKTRR-----RVASMA--------QRRAANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIE 126

Mouse   134 TLRFAYNYIWALAETLRLADQGLPGGSARER 164
            |||.|..||..:||.|    .|.|..|.:.|
  Fly   127 TLRLAITYIGFMAELL----SGTPSNSHKSR 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurog1NP_035026.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 6/22 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..82 11/42 (26%)
HLH 91..150 CDD:238036 28/58 (48%)
Fer3NP_524322.1 HLH 87..135 CDD:278439 24/47 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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