DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neurog1 and tap

DIOPT Version :10

Sequence 1:NP_035026.1 Gene:Neurog1 / 18014 MGIID:107754 Length:244 Species:Mus musculus
Sequence 2:NP_524124.1 Gene:tap / 39935 FlyBaseID:FBgn0015550 Length:398 Species:Drosophila melanogaster


Alignment Length:256 Identity:90/256 - (35%)
Similarity:116/256 - (45%) Gaps:74/256 - (28%)


- Green bases have known domain annotations that are detailed below.


Mouse    12 LDCSSSNSSSD---LSSFLTDEEDCARLQPLASTSGLSVPARRSAPALSGASNVPGAQDEEQERR 73
            ||.||::|:..   |...|...          :|:|:..|...|.|       |...:|....|.
  Fly    81 LDTSSNHSTRSGRTLVEHLNSR----------ATNGVFDPPLTSTP-------VKSPEDPNAPRP 128

Mouse    74 RRR---GRARV---RSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKI 132
            :|:   |:.||   ||...:..::|.||:||||||||||||||.||:.||..|||.|::||||||
  Fly   129 KRKYAVGKNRVTRSRSPTQVVKIKRFRRMKANDRERNRMHNLNDALEKLRVTLPSLPEETKLTKI 193

Mouse   133 ETLRFAYNYIWALAETLRLADQGLPGGS-------------ARERL---------LPPQCVPCLP 175
            |.||||:|||:||.:.|.      .|||             :.||:         :.||..| |.
  Fly   194 EILRFAHNYIFALEQVLE------SGGSINLDLEKLQNFTLSGERITKELFDALFVNPQPYP-LF 251

Mouse   176 GPPSPASDTESWGSGAAASPCAT-VASPLSDPSSPSASEDFTYG-------PGDPLFSFPG 228
            |...|      :|.|.|  |.|. ..:|.|....|.|...|.:|       ||   |.|.|
  Fly   252 GRMFP------YGQGMA--PLAQHQTAPASHAEQPPAMGGFQHGMDYPQQPPG---FDFTG 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurog1NP_035026.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 6/17 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..82 12/48 (25%)
bHLH_TS_NGN1_NeuroD3 83..154 CDD:381559 43/70 (61%)
tapNP_524124.1 bHLH_TS_NGN 155..211 CDD:381434 40/55 (73%)

Return to query results.
Submit another query.