DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurog1 and twi

DIOPT Version :9

Sequence 1:NP_035026.1 Gene:Neurog1 / 18014 MGIID:107754 Length:244 Species:Mus musculus
Sequence 2:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster


Alignment Length:169 Identity:56/169 - (33%)
Similarity:79/169 - (46%) Gaps:29/169 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 SSNSSSDLSSFLTDEEDCARLQPLASTS----GLSVPA----RRSAPALSGASNVPGAQDEEQER 72
            |:.||||     .|:.:.||...|:|.|    |:..||    ..||.:|...|:..|....:..|
  Fly   286 SAYSSSD-----RDDMEYARHNALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRKPRR 345

Mouse    73 RRRRGRARVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRF 137
            |.:|..::.......    .::||.||.|||.|..:||.|..:|:.::|:.|.| ||:||:||:.
  Fly   346 RLKRKPSKTEETDEF----SNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKL 405

Mouse   138 AYNYIWALAETLRLAD---------QGLPG--GSARERL 165
            |..||..|...|..:|         ||.|.  |||...|
  Fly   406 ATRYIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLL 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurog1NP_035026.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 5/10 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..82 14/50 (28%)
HLH 91..150 CDD:238036 25/58 (43%)
twiNP_001033967.1 HLH 363..413 CDD:278439 24/50 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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