DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurog1 and HLH3B

DIOPT Version :10

Sequence 1:NP_035026.1 Gene:Neurog1 / 18014 MGIID:107754 Length:244 Species:Mus musculus
Sequence 2:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster


Alignment Length:188 Identity:54/188 - (28%)
Similarity:72/188 - (38%) Gaps:39/188 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 PLETCISDLDCSSSNSSSDLSSFLTDEEDCARLQPLASTSGLSVPARRS---------------A 53
            |....|||.|..:..|...|:....||||   |:.....:|....|.||               |
  Fly    67 PKTESISDGDGDAELSDFSLNDTEEDEED---LRDYIVLNGNQADANRSLSSSPRSHSRNGLLTA 128

Mouse    54 PALSGAS---------NVPGAQDEEQERRRRRGRARVRSEALLHSLRRSRRVKANDRERNRMHNL 109
            ||.||:|         |..|            |.|.....:.:.:....|:|..|.|||.|..|:
  Fly   129 PASSGSSVGGSGGGGGNGSG------------GNASSGGGSGVGATGGVRKVFTNTRERWRQQNV 181

Mouse   110 NAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGSARERLLP 167
            :.|...||.::|:.|.|.||:|.|.||.|..||..|...|....:..|....|.::.|
  Fly   182 SGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHPIRAQMEP 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neurog1NP_035026.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 7/22 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..82 14/66 (21%)
bHLH_TS_NGN1_NeuroD3 83..154 CDD:381559 25/70 (36%)
HLH3BNP_525055.1 bHLH_TS_dHLH3B_like 166..225 CDD:381551 25/58 (43%)

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