Sequence 1: | NP_032705.2 | Gene: | Ncoa3 / 17979 | MGIID: | 1276535 | Length: | 1403 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014576.1 | Gene: | Clk / 38872 | FlyBaseID: | FBgn0023076 | Length: | 1027 | Species: | Drosophila melanogaster |
Alignment Length: | 1383 | Identity: | 284/1383 - (20%) |
---|---|---|---|
Similarity: | 442/1383 - (31%) | Gaps: | 550/1383 - (39%) |
- Green bases have known domain annotations that are detailed below.
Mouse 35 EKWRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIR---QIKEQGKTISSDDDV 96
Mouse 97 QKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSI 161
Mouse 162 LHEQDRKDFLKHL--PKSTVNGVSWTNENQRQKSHTFNCRMLMKTH---DILEDVNASPETRQRY 221
Mouse 222 ETMQCFALSQPRAMLEEGEDLQCCMICVARRVTAPFPSSPESFI--TRHDLSGKVVNIDTNSLRS 284
Mouse 285 SMRPGFEDIIRRCIQRFFSLNDGQSWSQKRHYQEAYVHGHAETP--VYRFSLADGTIVSAQTKSK 347
Mouse 348 LFRNPVTNDRHGFISTH-------FLQREQNGYRPNPNPAGQGIRPPAAGCGVSMSPNQNVQMMG 405
Mouse 406 SRTYGVPDPSN----------TGQMGGARYGASSSVASLTPGQS---LQSP---SSYQ-NS---- 449
Mouse 450 --------SYG-LSMSSPPHGSPGLGPNQQNIMISPRNRGSPKMASHQFSPAAGAHSPMGPSGNT 505
Mouse 506 GSHSFSSSSLSAL---QAISEGVGTSLL-STLSSPG-------PKLDNSPNMNIS--QPSKVSGQ 557
Mouse 558 DSKSPLGLYCEQNPVESSVCQSNSRDHPSEKESKESSGEVSETPRGPLESKGHKKLLQLLTC-SS 621
Mouse 622 DDRGHSSLTNSPLDPNCKDSSVSVTSPSGVSSSTSGTVSSTSNVHGSLLQEKHRILHKLLQNGNS 686
Mouse 687 PAEVAKITAEATGKDTSSTASCGEGTTRQEQLSPKKKENNALLRYLLDRDDPSDVLAKELQPQAD 751
Mouse 752 SGDSKLSQCSCSTNPSSGQEKDPKIKTETNEEVSGDLDNLDAILGDLTSSDFYNNPTNGGHPGAK 816
Mouse 817 QQMFAGPSSLGLRSPQPVQSVRPPYNRAVSLDSPVSVGSGPPVKNVSAFPGLPKQPILAGNPRMM 881
Mouse 882 DSQENYGANMGPNRNVPVNPTSSPGDWGLAN-------------------------SRASRMEPL 921
Mouse 922 AS----------SPLGRTGADYSATLPRPAMGGSVPTLP-------------------------- 950
Mouse 951 ---------------------LRSNRLPGARPSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQMLQ 994
Mouse 995 MRTGEIPMGMGVNPYSPAVPSNQPGSWPEGMLSMEQGPHGSQNRPLLRNSLDDLLGPPSNAEGQS 1059
Mouse 1060 DERALLDQLHTLLSNTDATGLEEIDRALGIPELVNQGQALESKQDVFQGQEAAVMMDQKAALYGQ 1124
Mouse 1125 TYPAQGPPLQGGFN--------LQGQSPSFNSMMGQISQQGSFPLQG-----MHPRAGLVRPRTN 1176
Mouse 1177 TPKQLRMQLQQRLQGQQFLNQ-SRQALEMKMENPAGTAVMRPMMPQQAFFNAQMAAQQK----RE 1236
Mouse 1237 LMSHHLQQQRMAMMMSQP 1254 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ncoa3 | NP_032705.2 | bHLH_SF | 33..102 | CDD:381792 | 18/69 (26%) |
PAS | 117..172 | CDD:214512 | 20/54 (37%) | ||
PAS_11 | 262..372 | CDD:373151 | 21/120 (18%) | ||
NCOA_u2 | 451..564 | CDD:374708 | 30/126 (24%) | ||
SRC-1 | 608..696 | CDD:370145 | 21/88 (24%) | ||
DUF4927 | 714..801 | CDD:374467 | 10/86 (12%) | ||
Nuc_rec_co-act | 1056..1103 | CDD:312376 | 8/46 (17%) | ||
Med15 | 1094..>1398 | CDD:312941 | 37/179 (21%) | ||
DUF1518 | 1270..1326 | CDD:369380 | |||
Clk | NP_001014576.1 | HLH | 16..68 | CDD:238036 | 15/50 (30%) |
PAS | 93..153 | CDD:214512 | 21/59 (36%) | ||
PAS | 264..366 | CDD:238075 | 27/129 (21%) | ||
PAS_11 | 265..368 | CDD:291273 | 27/130 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |