DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment F10C2.3 and CG32985

DIOPT Version :9

Sequence 1:NP_506015.2 Gene:F10C2.3 / 179650 WormBaseID:WBGene00008644 Length:604 Species:Caenorhabditis elegans
Sequence 2:NP_788013.2 Gene:CG32985 / 326244 FlyBaseID:FBgn0052985 Length:644 Species:Drosophila melanogaster


Alignment Length:701 Identity:185/701 - (26%)
Similarity:275/701 - (39%) Gaps:168/701 - (23%)


- Green bases have known domain annotations that are detailed below.


 Worm     3 RRLGAFVLFFLCTTVFLFPDLFASSTISRNLKTRRSVARQK--QNSSSKCVVPTLDP-------- 57
            :||  .|.|...|.:.|:.  ..||.:..|...|.|...:|  ...|.||.:..::|        
  Fly    10 KRL--IVSFLAVTLICLWS--MNSSRVDENFSARDSQEVEKLFYVESGKCKMRYVNPFNAEFLKI 70

 Worm    58 -------------------WDQSILEYVLDDG---------SRPTQLACHDAKV----------- 83
                               :|:.:.:|||...         |:....||...|:           
  Fly    71 NHPKAFIPCTNESDLISVHYDKILNQYVLHTNEEVLHELSESKTNDFACFYQKIIYGQSAEHYDG 135

 Worm    84 --------QPELTFLDENGVLQLNSTAVSESSLKVECQYRTYDKMDGDDEQLNYSEWISFNMSVK 140
                    |..|..||..|:|             |||  ||.|:                 |.|.
  Fly   136 KGVKTKISQNHLVPLDVEGML-------------VEC--RTADE-----------------MRVL 168

 Worm   141 IESEFVEVSCQRAWFPRTKVYSNNHNQIIPISRSQPVSDKSSVIVIVLDSVSHSNFRRTMNKTLD 205
            ....||.|.           |.:....:.|:.       |:|||:..:|:||.:|.||.|....:
  Fly   169 QRDAFVFVQ-----------YKDPPQNVKPVK-------KASVIMYGIDTVSRTNLRRMMPMVFE 215

 Worm   206 VMHSLYGSFIFDGMTKIGDNSFSNAVGFFAG--------KWWNTEFGDAHGYFDDHDLIWKHYRE 262
            .:.| .|.:...|..|:.||||.|......|        :..||   |..|..|....|||.:::
  Fly   216 FLKS-PGWYEMMGYNKVADNSFPNIFAMLTGFSPESAETQICNT---DVDGCLDKIPFIWKDFKK 276

 Worm   263 NGYRTLYAEDYPGFNLFNYLSKGFKKKPVDHYFRPYWL----NVYWTYVHRRSRNLCYGNHRMHN 323
            :||.|.||||....|.|||...||..||.|:||||:..    ..:..|........|.|.....:
  Fly   277 DGYLTAYAEDEEHSNTFNYAKPGFAVKPTDYYFRPFLTALENETFIQYCPGCVMKYCLGRRLASS 341

 Worm   324 LQLNYLSQFVSKY-KDQPKFAISWLTELGHD---WLNQVRYGD-EDLANFLKKHVEDLENSYLFI 383
            ...:|..||:.:: .|:|.:.:.|.....||   .|:.:::.. |||.:|.|..|  .|::.:..
  Fly   342 YIFDYCRQFMQRFVADRPIWGMFWTNHYSHDDLFMLSAMQHKILEDLLSFEKDGV--FEHTIMIF 404

 Worm   384 MSDHGHRFDNIRKTSIGRLEERLPFFSVSLPKKLRKD-SKLVDTVRKNSKKLTSFFDVYATFRHI 447
            .||||.||..:..|....||||||...:.||...||. .:.|:.:.:|..:|:|.||:|.|.:||
  Fly   405 FSDHGARFGPLMYTKEAFLEERLPMMFIYLPPWFRKKYPRYVEALAQNQNRLSSNFDLYNTLKHI 469

 Worm   448 LN------NSK-QPDVMRGESLFLPI-KDRNCETAHIPEEFCVCDTEVPLNVS------ANAQIR 498
            :|      ::| ..|..:.:|||.|: :.|:|..|.|||.:|.|.....:...      ||..:.
  Fly   470 INIEGLVEDTKWSYDCPQCQSLFYPLPESRSCSEAAIPEAYCTCHNYEEIKEDQGTWRLANLVVD 534

 Worm   499 TMAEDFAKDINQRLDPH---PQCVQLYLKNVISVSQVGDVKE-------QRYRFTIEVSPSNAIF 553
            .|        |:.|..|   ..|..|.|:.:.|.....|.|:       :.|....:|..:.|.|
  Fly   535 RM--------NKYLHYHNLQNLCSNLTLRVINSTEVRMDDKDVDLANGMRHYHTKFQVHQNLAEF 591

 Worm   554 EALLLYDPFESQTTV-IGDINRINKYGNQSLCVQDQFLRKLCFCSTFLEAV 603
            .|.:|||....:..: :..|:|.|.||..|.||.::..:..|.|.:.|.|:
  Fly   592 FATVLYDKQTEELQMNVELISRTNMYGTDSECVNNKIQKLYCVCLSKLRAI 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
F10C2.3NP_506015.2 DUF229 110..527 CDD:281053 132/451 (29%)
ALP_like 182..451 CDD:293745 95/292 (33%)
CG32985NP_788013.2 DUF229 72..554 CDD:308570 145/545 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10974
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.