DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo5b and didum

DIOPT Version :9

Sequence 1:XP_006525777.1 Gene:Myo5b / 17919 MGIID:106598 Length:1849 Species:Mus musculus
Sequence 2:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster


Alignment Length:1939 Identity:745/1939 - (38%)
Similarity:1122/1939 - (57%) Gaps:229/1939 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MSYSE-LYTRYTRVWIPDPDEVWRSAELTKDYKEGDKSLQLRLEDDTILEYPVDVQNNQVPFLRN 64
            ||..| ||.:..::|:|..|.||.||.|.:.|::|...|::..:...:.|..:....:.:|.|||
  Fly     1 MSSEEMLYAQGAKIWVPHADLVWESATLEESYRKGAGFLKICTDSGKLKEVKLKADGSDLPPLRN 65

Mouse    65 PDILVGENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYGQDVIYAYSG 129
            |.||||:||||.||:||||.|||||:|||.|...|||||||:|||||||.::|:||..:|.||.|
  Fly    66 PAILVGQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRG 130

Mouse   130 QNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGSASDTNIEE 194
            ..|||::|||||:|||||.::.|:..|.||||||||||||||||||||||||.||||.|:|.:|.
  Fly   131 HAMGDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVER 195

Mouse   195 KVLASSPIMEAIGNAKTTRNDNSSRFGKFIEIGFDKKYHII---GANMRTYLLEKSRVVFQADDE 256
            |||||||||||.|||||||||||||||||.::.|..:..::   ||.|.||||||||||:||..|
  Fly   196 KVLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGE 260

Mouse   257 RNYHIFYQLCAAASLPEFKELALTCAEDFFYTAHGGNTTIEGVNDADDFEKTRQALTLLGVRDSH 321
            ||||||||||||.|  ::.||.|...:.|.:...||...||.|:||:.|.:|.||:|:||.....
  Fly   261 RNYHIFYQLCAARS--KYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQ 323

Mouse   322 QISIFKIIASILHLGSVEI-------QSERDGDSCSISPQDEHLSNFCSLLGIEHSQMEHWLCHR 379
            ...|.||:|.|||||::::       ..|.|.|||.|...|.||.....||.:....:..||..|
  Fly   324 IADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMR 388

Mouse   380 KLVTTSETYVKTMSLQQVVNARDALAKHIYAQLFSWIVEHINKALHTSLKQHSFIGVLDIYGFET 444
            |:.:.:|..:...|::....|||||||||||:||.:||..:||:|:...||.|||||||||||||
  Fly   389 KIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDIYGFET 453

Mouse   445 FEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDL 509
            ||:||||||||||||||||||||.||||||||||:||.|.||:||||||||||||||::||:|||
  Fly   454 FEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRLGVLDL 518

Mouse   510 LDEECKVPKGTDQNWAQKLYERHSNSQHFQKPRMSNTAFIVNHFADKVEYLSDGFLEKNRDTVYE 574
            |||||::|||:|::||.||..:.:...||:|||...|:|.:.||:|.|||..:||||||||||.:
  Fly   519 LDEECRMPKGSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFLEKNRDTVSK 583

Mouse   575 EQINILKASKFPLVADLFHDDKDSAPATNTAKNRS-SSKINVRSSRPLIK----------VPNKE 628
            |...:|..|...|...:...::......::||:.: ..::.:.:.|   |          ||:|:
  Fly   584 ELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGR---KQQGNDTRRRVVPSKQ 645

Mouse   629 HKKSVGYQFRTSLNLLMETLNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAA 693
            |:|:||.||:.||..|:.||:||||||||||||||:|:.|.::..:.:|||||||||||:|||||
  Fly   646 HRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVRISAA 710

Mouse   694 GYPSRWTYHDFFNRYRVLMKKRELTNTDKKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLE 758
            |:||||.|.||:.||::|:.:.:|...|.|..|::::...|:|.||::||.|:|||||||||:||
  Fly   711 GFPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMKWIQDEDKYRFGNTQIFFRAGQVAFLE 775

Mouse   759 KLRADKFREATIMIQKSVRGWLQRVKYRRLRAATLSLQRFCRGYLARRLAEHLRRTRAAIVFQKQ 823
            ::||:..::...::|..||.::.|.::.|::.....:|:..||||||...:.:|..||.::..|.
  Fly   776 QVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMREARAGLILSKY 840

Mouse   824 YRMLKARRAYRRVCRATVIIQSFTRAMFVRRNYRQVLMEHKATIIQKYARGWMARKRFLRERDAA 888
            .|....||.|.|:..:...||::.|.|..|..:..:...::|..||::.||.:||:.:.:.|...
  Fly   841 ARGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVRGALARRAYQKRRRNI 905

Mouse   889 IVIQCAFRRLKARQELKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAVT 953
            |:.|.|.||..||::.|.:|.||::..|::...:|:|||::.:|::||:.|::...|..:.|.::
  Fly   906 IICQAAIRRFLARRKFKRMKAEAKTISHMENKYMGLENKIISMQQRIDELNRDNSNLKHKTSEIS 970

Mouse   954 SSHAVEVEKLKKELAHYQQNQEADTSLQLQEE---VQSLRTELQKAHSERRVL--EDAH------ 1007
                  |.|:|.||....:.:..:.....|::   :::|..:|:....|:..|  |:.|      
  Fly   971 ------VLKMKLELKKTLEAEFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGHAQEEWI 1029

Mouse  1008 ------NKENGELRKRVADLEHENALLKDEKEYLNNQILCQSK-AESSQSSVEENLLMKKELEEE 1065
                  .:||.|||:::                  ::|:..:| ||.:|.:.|:.:|.:.:..|.
  Fly  1030 SQKQTWRQENEELRRQI------------------DEIIDMAKNAEVNQRNQEDRMLAEIDNREL 1076

Mouse  1066 RSRYQNLVKEYSQLEQRYENLRDEVTILKQTPG----HRKNPSNQSSL-ESDSNYPSI-STSEIG 1124
            ...||..:|:...:|.....|::|::.|  |.|    |.:..||.||. |.|..|.|. :|.:|.
  Fly  1077 NEAYQRAIKDKEVIENENFMLKEELSRL--TAGSFSLHARKASNASSQNEDDVGYASAKNTLDIN 1139

Mouse  1125 DTEDALQQVEEIGIEKAAMDMT-VFLKLQKRVRELEQERKKLQAQLEKGQQDSKKGQVEQQNNGL 1188
            ...|.|.:      ..:..|.| :.:||:..:.|.:|:.|.||.|..|.....|..:        
  Fly  1140 RPPDLLSK------NYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHKPTE-------- 1190

Mouse  1189 DVDQDADIAYNSLKRQELESENKKLKNDLNELRKAVADQAMQDNSTHSSPDSYSLLLNQLKLAN- 1252
                      :|.:..|||.||:||:::.::||.::               .:.:.:|:|...: 
  Fly  1191 ----------DSFRVSELEVENEKLRSEYDQLRTSI---------------KHGVEINELNAQHA 1230

Mouse  1253 ---EELEVRKEEVLILRTQIMNADQRRLSGKNMEP-NINARTSWPNSEKHVDQEDAIEAYHGVCQ 1313
               ||:..|:||.:.|:..::...|   |.:::|| ::..|.:        |..:.:||:|    
  Fly  1231 ALQEEVRRRREECIQLKAVLLQQSQ---SMRSLEPESLQMRGN--------DVNELMEAFH---- 1280

Mouse  1314 TNSQTEDWGYLNEDGELGLAYQGLKQVARLLEAQLQAQSLEHEEEVEHLKAQVEALKEEMDKQQQ 1378
              ||                    |.:.|.||::|:|.:.||..::..:..::|.|..|.|:.|:
  Fly  1281 --SQ--------------------KLINRQLESELKAITEEHNSKLVEMTQEIERLNNEKDELQK 1323

Mouse  1379 TFCQTLLLSPEAQVEFGVQQEISRLTNENLDFKELVEKLEKNERKLKKQLK----IYMKKVQDLE 1439
            ...::                |....:.|:|      .|.:|:|.|:::|:    .::...::|:
  Fly  1324 VMFES----------------IDEFEDSNVD------TLRQNDRYLRRELQKAVAQFLLVQEELK 1366

Mouse  1440 AAQALAQSDRR-----HHELTRQV---------------TVQRKEKDFQGMLEYHKEDEALLIRN 1484
            .|.|..::.|:     .|::..::               ..::|.::.||::::|..|...:::.
  Fly  1367 LANAKLKAYRQDGGQLEHKIEEEMIRNKSNGTSADVGANVTKQKSQNPQGLMKFHSSDLDKILQR 1431

Mouse  1485 LVTDLKPQMLSGTVPCLPAYILYMCIRHADYTNDDLKVHSLLSSTINGIKKVLKKHNDDFEMTSF 1549
            |::.|.|:.:.|.:|..|||:::||||:.|.||.|..|..|||..:..||| :.:.....|....
  Fly  1432 LLSALTPRTVVGLLPGFPAYLIFMCIRYTDLTNADDDVRELLSKFVIQIKK-MHRTPHPIENRVI 1495

Mouse  1550 WLSNTCRFLHCLKQYSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGLL 1614
            ||.|:...|:.:|||...:.::..||.|||:..||||:|.|||:|:.||.:.:||.||...:|||
  Fly  1496 WLVNSITLLNLMKQYGDVDEYVKFNTEKQNQQQLKNFNLFEYRRVILDLIVNLYQALIMQIQGLL 1560

Mouse  1615 QPMIVSAMLENESIQGLSGVRPTGYRKRSSSMVDGENSY-------CLEAIVRQMNSFHTVLCDQ 1672
            .|.||.|:|.|:.||  .|.:..|.|.|::|:  |.:|.       ..:.::.|:..|:......
  Fly  1561 DPKIVPAILNNDEIQ--RGRQAHGMRSRATSI--GASSSPEHGGGPAWKQLIGQLEHFYKQFQHF 1621

Mouse  1673 GLDPEIILQVFKQLFYMINAVTLNNLLLRKDACSWSTGMQLRYNISQLEEWLRGKNLHQSGAVQT 1737
            |||.....|:|.||.|.|.||.||.|:||.|.|.|.|||.:||||..:|:|:|.|.: .:..:..
  Fly  1622 GLDNCYAEQIFHQLLYFICAVALNCLMLRGDICMWETGMIIRYNIGCIEDWVRSKKM-SNDVLTA 1685

Mouse  1738 MEPLIQAAQLLQLKKKTHEDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVSFI----RTI 1798
            :.||.|.:|||| .:|:.:|.:.||.|||||||.|::|::..| .|:::|..:|..|:    ..:
  Fly  1686 LAPLNQVSQLLQ-SRKSEQDVQTICDLCTSLSTAQVLKVMKSY-KLDDYESEITNVFLEKLTEKL 1748

Mouse  1799 QAQLQERNDPQQLLLDSKHV--FPVLFPYNPSALTMDSIHIPACLNL-EFLNEV 1849
            .|:..::::..:..:|.|.:  |.|:|.|  |.:.::.|.:|:.||| |||.::
  Fly  1749 NARQMQKSNSDEFTIDQKFIQPFKVVFRY--SDIKLEDIELPSHLNLDEFLTKI 1800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo5bXP_006525777.1 COG5022 11..>1268 CDD:227355 556/1306 (43%)
MYSc_Myo5 83..750 CDD:276831 382/687 (56%)
EnvC 1136..>1449 CDD:227278 65/322 (20%)
Myo5b_CBD 1475..1846 CDD:271261 141/384 (37%)
didumNP_724569.1 MYSc 65..778 CDD:214580 406/717 (57%)
MYSc_Myo5 84..767 CDD:276831 382/687 (56%)
IQ 900..922 CDD:197470 8/21 (38%)
GBP_C <971..1086 CDD:303769 27/132 (20%)
coiled coil 1049..1068 CDD:293879 6/18 (33%)
coiled coil 1077..1086 CDD:293879 2/8 (25%)
JAKMIP_CC3 <1190..1299 CDD:292653 35/178 (20%)
Myo5_CBD 1424..1792 CDD:271254 137/377 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 763 1.000 Domainoid score I81
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1254 1.000 Inparanoid score I175
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52542
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - otm43121
orthoMCL 1 0.900 - - OOG6_100101
Panther 1 1.100 - - LDO PTHR13140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4210
SonicParanoid 1 1.000 - - X244
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.870

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