Sequence 1: | XP_006510890.1 | Gene: | Myo5a / 17918 | MGIID: | 105976 | Length: | 1880 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
Alignment Length: | 2090 | Identity: | 559/2090 - (26%) |
---|---|---|---|
Similarity: | 928/2090 - (44%) | Gaps: | 445/2090 - (21%) |
- Green bases have known domain annotations that are detailed below.
Mouse 4 SELYTKFARVWIPDPEEVWKSAELLKDYK--PGDKVLLLHLEEGKDLEYRLDPKTGELPHLRNPD 66
Mouse 67 ILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQN 131
Mouse 132 MGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGS-------ASE 189
Mouse 190 ANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAE 254
Mouse 255 EERNYHIFYQLCASAKLPEFK--MLRLGNADSFHYTKQGGSPMIEGVDDAKEMAHTRQACTLLGI 317
Mouse 318 SESYQMGIFRILAGILHLGNVGFASRDSDSCTIPPKHEPLTIFCDLMGVDYEEMCHWLCHRKLAT 382
Mouse 383 ATETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVNQALHSAVKQHSFIGVLDIYGFETFEIN 447
Mouse 448 SFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDF-YDNQPCINLIESKLGILDLLDE 511
Mouse 512 ECKMPKGTDDTWAQKLYNTHLNKCALFEKPRMSNKA-----FIIKHFADKVEYQCEGFLEKNKDT 571
Mouse 572 VFEEQIKVLKSSKFKMLPELFQDDEKAISPTSATSSGRTPLTRVPVKPTKGRPGQTAK--EHKK- 633
Mouse 634 ----TVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISA 694
Mouse 695 AGFPSRWTYQEFFSRYRVLMKQ--KDVLGDRKQTCKNVLEKLI-LDKDKYQFGKTKIFFRAGQVA 756
Mouse 757 YLEKLRADKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTI 821
Mouse 822 QKYWRMYVVRRRYKIRRAATIVIQSYLRGYLTRNR--YRKILREYKAVIIQKRVRGWLARTHYK- 883
Mouse 884 --------RTMKAIVYLQCCFRRMMAKRE--LKKLKIEARSVERYKKLHIGMENKIMQLQRKVDE 938
Mouse 939 QNKDYKCLMEKLTNLEGVYN----------SETEKLRNDVERLQL----SEEEAKVATGRVLSLQ 989
Mouse 990 EEIA-------KLRKDL-------EQTRSEKKSIEERAD-------KYKQETDQLVSNLKEENTL 1033
Mouse 1034 ---LKQEKETL--NHRIVEQA--------KEMTETMERKLVEETKQLELDLNDER---LRYQNLL 1082
Mouse 1083 NEFSRLEERYDDLKEEMTLMLNV-PKPGHKRTDSTHSSNESEYTFSSEFAETEDIAPRTEE---P 1143
Mouse 1144 IEKKVPLDMSLFLKLQKRVTELEQEKQLMQDELDRKEEQVFRSKAKEEERPQIRGAELEYESLKR 1208
Mouse 1209 QELESENKKLKNE----LNELRKAL----SEKSAPEVTAPGAPAYRVLMEQLTSVSEEL------ 1259
Mouse 1260 ----DVRKEEVLILRSQLVSQKEAIQPKDDK--NTMTDSTILLEDVQKMKDKGEIAQAYIGLKET 1318
Mouse 1319 NRSSTMD-------------------YQELNEDGELW-MVYEG--------LKQANRLLESQLQS 1355
Mouse 1356 QKRSHEN----------EAEALRGEIQSLKEENNR--------------------QQQLLAQNLQ 1390
Mouse 1391 LPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYR---ISLYKRMIDLMEQLEKQDKTVR 1452
Mouse 1453 KLKKQLKVFAKKIGELEVG---------QMEN------ISPGQIIDEPIRPVNIPRKEKDFQGML 1502
Mouse 1503 EYKREDEQKLVKNLILELKPRGVAVNLIPGLPAYI--LFMCVRHADYLN-DDQKVRSLLTSTINS 1564
Mouse 1565 IKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEYRQVLSD 1629
Mouse 1630 L---AIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILR 1691
Mouse 1692 QLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLL------------LRKDMCSWSKGMQI 1744
Mouse 1745 RYN-------------VSQLEEWLRD----------------KNLMNSGAK-------------- 1766
Mouse 1767 -ETLEPLI-QAAQLLQVKKKTDDDAEAICSMCNALTTAQIVKVLNLYTPVNEFEERVSVSFIRTI 1829
Mouse 1830 QMRLRDRKDS 1839 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myo5a | XP_006510890.1 | COG5022 | 7..1448 | CDD:227355 | 472/1616 (29%) |
MYSc_Myo5 | 83..751 | CDD:276831 | 284/692 (41%) | ||
Myo5a_CBD | 1506..1880 | CDD:271262 | 72/397 (18%) | ||
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 15/45 (33%) |
MYSc | 81..777 | CDD:214580 | 293/723 (41%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 284/692 (41%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 220/1162 (19%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 67/373 (18%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 28/129 (22%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 16/90 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |