DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo5a and dachs

DIOPT Version :10

Sequence 1:XP_006510890.1 Gene:Myo5a / 17918 MGIID:105976 Length:1880 Species:Mus musculus
Sequence 2:NP_001188730.1 Gene:dachs / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster


Alignment Length:825 Identity:241/825 - (29%)
Similarity:365/825 - (44%) Gaps:142/825 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    46 KDLEYRLDPKTGELPHLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAI 110
            ||::        :|.||..|              |.|.||:..|:.|| :.:..:|..|.:|::|
  Fly   473 KDMQ--------DLIHLSGP--------------LTEHAVMRTLQARF-NERRYFTNVGPILLSI 514

Mouse   111 NPYEQLPIYGEDIIN--AYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSA 173
            |||       .|:.|  ..:......:.|.:..:.:||.:|.:.....|:||:||.||||||.:|
  Fly   515 NPY-------LDVGNPLTLTSTRAMPLAPQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANA 572

Mouse   174 KYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGAN 238
            ...:|....::|...|.:..:.:.|:..::.|:|:||||.|..|||.|::||:....     ||.
  Fly   573 MLMLRQLFAIAGGGPETDAFKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEVQVTD-----GAL 632

Mouse   239 MRT----YLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADSFHYTKQGGSPM---- 295
            .||    |.|:::||:....:|:||||||||.|.....|.:.|.|          .|.||.    
  Fly   633 YRTKIHCYFLDQTRVIRPLPKEKNYHIFYQLLAGLSREERQKLHL----------DGYSPANLRY 687

Mouse   296 ---IEGVDDAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFASRDSDSCTIPPKHE-P 356
               ..|.::.::.|..:...|.|||.....:.:.|:||.:|.||||.|.  |.....:..|.| .
  Fly   688 LRGDIGQNEQEDAARFQAWKTCLGILGIPFLDVVRVLAAVLLLGNVQFI--DGGGLEVDVKGETE 750

Mouse   357 LTIFCDLMGVDYEEMCHWLCHRKLATATETYIKPISKL-----QATNARDALAKHIYAKLFNWIV 416
            |.....|:||....:     .|.|.|.|......:.|.     .|...||.|||.:|.:....||
  Fly   751 LNSVASLLGVPPAAL-----FRGLTTRTHNVRGQLVKSVCGDGDANMTRDCLAKALYCRTVATIV 810

Mouse   417 DHVNQ--------------------------------------------ALHSAVK---QHSFIG 434
            ...|.                                            ||::||:   ...|||
  Fly   811 RRANSLKRLGSTLGTLSSDSNESVHNQADVASQHASTIGGGNAGSKSMAALNNAVRHATSDGFIG 875

Mouse   435 VLDIYGFETFEINS-FEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW-TLIDFYDNQPCIN 497
            :||::|||....:: .|..|||...|.:|..:|.|:||...|....|.|.. |.:|:.||.|||:
  Fly   876 ILDMFGFEEPSPHAHLEHLCINLCAETMQHFYNTHIFKSSVESCRDEGIVCDTEVDYVDNVPCID 940

Mouse   498 LIES-KLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEKPRM---SNKAFIIKHFADKVE 558
            ||.| :.|:|.:||.||.: :||.:::..||...|.:...|..||..   ..:.|:|:|||.:||
  Fly   941 LISSLRTGLLSMLDAECSV-RGTAESYVTKLKVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVE 1004

Mouse   559 YQCEGFLEKNKDTVFEEQIKVL--KSSKFKMLPELFQDDEKAISPTSATSSGRTPLTRVPVKPTK 621
            |....||:.|:|.|.::.:.|.  .:..|.....||..:.||:........|.:    ..:.||.
  Fly  1005 YDTTDFLDTNRDVVPDDLVGVFYKHTCNFGFATHLFGSELKALYAQQQAPRGLS----FRISPTS 1065

Mouse   622 GRPGQTAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGV 686
            ........|...|:...|...|..|:.||....||:||||:.|..:...:||....|:|:|:..|
  Fly  1066 HSDLLNGDEPVSTLTQDFHTRLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQV 1130

Mouse   687 LETIRISAAGFPSRWTYQEFFSRYRVL-------MKQKDVLGDRKQTCKNVLEK-LILDKD---K 740
            |||:.:.|:|||.|..:::|.:|||:|       ..:...|.|.:...|..:|: .:||..   .
  Fly  1131 LETVNLMASGFPHRMRFKQFNARYRMLAPFRLLRRSEDKALEDCQLILKYAMEQPPVLDGSVTLA 1195

Mouse   741 YQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGWLLRKR 785
            :..||..:|...|...:||.||.:....:...:|.|.|||..||:
  Fly  1196 WAPGKRHVFLSEGIRQHLEHLRTEIRHKSATLMQATWRGWWWRKK 1240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo5aXP_006510890.1 COG5022 7..1448 CDD:227355 241/825 (29%)
MYSc_Myo5 83..751 CDD:276831 221/752 (29%)
Myo5a_CBD 1506..1880 CDD:271262
dachsNP_001188730.1 MYSc_Myo20 488..1206 CDD:276847 221/752 (29%)
IQCD 1219..1250 CDD:467745 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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