| Sequence 1: | NP_504862.2 | Gene: | lmd-4 / 179121 | WormBaseID: | WBGene00017233 | Length: | 2011 | Species: | Caenorhabditis elegans |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001036422.1 | Gene: | Cht10 / 3355116 | FlyBaseID: | FBgn0250907 | Length: | 2286 | Species: | Drosophila melanogaster |
| Alignment Length: | 1632 | Identity: | 318/1632 - (19%) |
|---|---|---|---|
| Similarity: | 532/1632 - (32%) | Gaps: | 609/1632 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Worm 604 VTTPVSGQSRTTSSSNQG------NNSTRAPTGQCEQKIKVKEGDTCFKIWSAQKMTEQQFMEMN 662
Worm 663 RGLDCNKLMVGKEVCVSGGSNPGSPEENSNTTKPALPMVETSGTCNEYATITPGNTCFNISVAYG 727
Worm 728 INLTDLQKTYDCKALEVGDTICVSQNYTCQHRIEVIKGDTCWFLENAFKTNQTEMERANEGVKCD 792
Worm 793 NLPIGRMMCVWSAD-------DRKL----PNMTCTEWK---TM--NDESSDCYGEARNSSITIDL 841
Worm 842 FKFLNPRV-NCTNRQKIPKGSKICVKSQSTKNCTSIQMFNQYQSC-NQVMQQNQI-------SMR 897
Worm 898 KLMDLNPTFRCDRLQKSEQICLGTGPFKQEQCISSRRVTPENDNCEKITRLTGL-SRGQIETLNP 961
Worm 962 GIKCEKPF---EWGSLICTASLGVDTRQAQDLIVTSLKDIAPELVKMFDNYNSNPSEANENAMNE 1023
Worm 1024 ELLADLQKPAV----NSKLKELYKSDEKIRKILDSQHPLPREKYCEEIKKTKMSDNIKNCYCEN- 1083
Worm 1084 --------------------------------EELLL-------------YCQVLATK------- 1096
Worm 1097 VILDGEDWNSPQNTTVLRAFRS----KRQVGCSFSTPSSGEDTLSVFKNLYGGCFAGGCTFPFGL 1157
Worm 1158 VEISVEADICVPSVTFAKDTVLYCAKDKNDCTKKENEDVPG----LKYLAD--RKLGGVISLCAV 1216
Worm 1217 GSKLAKLLTKG----GLSLCWEILAADYFGFIGKLDLSS-------------------------- 1251
Worm 1252 ------NLRLVV------------------------VDVEGGATMKVHG-LAFPDMCEHSEFQCE 1285
Worm 1286 DYCRWRA--DEWDNGKAYGYLKFKALKVFGFSGFKLLEESFDEPSRVGCDEGKEAAVVLRNTRTC 1348
Worm 1349 KDQAER----EIQRRCWSGDDMMGWDKLDKEWSFAFQPHIFGRTLFVCEFTDKHN--------QK 1401
Worm 1402 IGFDV------YGGKSDNKGKATFYYVVKNDGIYFGTEKYKEDKLMGSWDNKCEEDKPEPPKPDP 1460
Worm 1461 SKVEEPTGKSSLPAASCGKRIVGYYTGW------GDREITENQLKKL-THVIFAFVAMYEDGSVK 1518
Worm 1519 FGAVSEDDSGPQAAKKAERRFLNMKKKARAANSGVRVLFAVGGWDNS--QYFSSVAADSGKRKKF 1581
Worm 1582 VDSIASFVEDQKIDGVDLDWEYP-----DSNGKDAKNHVQLIKEIREKFSEMAKKKKRKDPYVIT 1641
Worm 1642 LASAAGEWNLRKGYDLKGILKYADFINVMTYDYYGAWESKWGAYTGTPAPLYFGSLKGFSGKLNA 1706
Worm 1707 DFSMKFYACKTEKPSQLNMGVPFYGRYWKNVLGPIDKSDNMWRTAAPQNGKYEGGYVGWRNLAK- 1770
Worm 1771 -------------EGWNK--------GSASWHEKTKTPYIMNNGAKKFLGFENERSLKEKMKYAT 1814
Worm 1815 DRNLGGLMIWALDLDDDADTLLNLVSSAGLCSGGKGDKVTYKCVPIDDVRWWTPENSDEKKQGQC 1879
Worm 1880 GKSAPLINGFYPVCDPDDPGFSCCGAAGYCGSGKEYCDCKGCVNYRKDPDLIIKKPVKPSREIQW 1944
Worm 1945 YTQDAPDGKRGRCGKDIE-------------KINGKMPICNPDDDTK-YCCSNGGY----CGIG- 1990
Worm 1991 ---KEFC 1994 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| lmd-4 | NP_504862.2 | LysM | 25..65 | CDD:197609 | |
| LysM | 79..120 | CDD:197609 | |||
| LysM | 142..185 | CDD:197609 | |||
| LysM | 209..250 | CDD:197609 | |||
| LysM | 270..313 | CDD:197609 | |||
| LysM | 334..377 | CDD:197609 | |||
| LysM | 401..444 | CDD:197609 | |||
| LysM | 469..509 | CDD:197609 | |||
| LysM | 550..590 | CDD:197609 | |||
| LysM | 635..678 | CDD:197609 | 3/42 (7%) | ||
| LysM | 710..750 | CDD:197609 | 9/39 (23%) | ||
| LysM | 760..802 | CDD:197609 | 5/41 (12%) | ||
| LysM | 876..919 | CDD:197609 | 9/50 (18%) | ||
| Self-incomp_S1 | 1359..1433 | CDD:283566 | 11/87 (13%) | ||
| Glyco_18 | 1480..1825 | CDD:214753 | 95/380 (25%) | ||
| GH18_chitinase-like | 1481..1824 | CDD:299167 | 94/378 (25%) | ||
| ChtBD1_GH18_2 | 1873..1924 | CDD:211315 | 9/50 (18%) | ||
| ChtBD1_GH18_2 | 1951..2002 | CDD:211315 | 14/66 (21%) | ||
| Cht10 | NP_001036422.1 | Glyco_18 | 220..565 | CDD:214753 | |
| GH18_chitolectin_chitotriosidase | 221..586 | CDD:119351 | |||
| ChtBD2 | 697..737 | CDD:214696 | 8/56 (14%) | ||
| CBM_14 | 801..848 | CDD:279884 | 10/63 (16%) | ||
| CBM_14 | 875..918 | CDD:279884 | 13/73 (18%) | ||
| Glyco_18 | 966..1310 | CDD:214753 | 65/418 (16%) | ||
| GH18_chitolectin_chitotriosidase | 967..1331 | CDD:119351 | 71/464 (15%) | ||
| Glyco_18 | 1410..1753 | CDD:214753 | 100/385 (26%) | ||
| GH18_chitolectin_chitotriosidase | 1411..1774 | CDD:119351 | 107/447 (24%) | ||
| ChtBD2 | 1834..1871 | CDD:214696 | 11/35 (31%) | ||
| Glyco_18 | 1909..2253 | CDD:214753 | |||
| GH18_chitolectin_chitotriosidase | 1910..2274 | CDD:119351 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C160164210 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG3325 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 1 | 1.000 | - | - | mtm4747 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 5 | 4.740 | |||||