DRSC/TRiP Functional Genomics Resources

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Protein Alignment exp-2 and Shawl

DIOPT Version :10

Sequence 1:NP_001367760.1 Gene:exp-2 / 179003 WormBaseID:WBGene00001374 Length:510 Species:Caenorhabditis elegans
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:516 Identity:132/516 - (25%)
Similarity:209/516 - (40%) Gaps:144/516 - (27%)


- Green bases have known domain annotations that are detailed below.


 Worm    81 LNIGGTSFMILIDAILRADTTTFLSRFVQLTHTARLKVADA-YISADDAYYFQRSPTSFEAVFQY 144
            ||:.|          :|.:|.....:.:..|..:||..|.| |....:.|:|.|.|..|..:..|
  Fly     9 LNVSG----------IRYETYKATLKKIPATRLSRLTEALANYDPVLNEYFFDRHPGVFTQILNY 63

 Worm   145 YATGVVHRPSEICPASFLSELDFWRISHQHVGSCC-------------------ADIIPQKREEE 190
            |.||.:|.|:::|...|..||:||.:....|..||                   .||..:|..||
  Fly    64 YRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTEE 128

 Worm   191 K------EEEKVDDTTFDKLMC-GKLRRRMWTFLERPGSSMQAKAFELSSTLFVAISVMGLSFGT 248
            :      .||.:.:   .:|.| .:::.::|...:.|.||..||.....|..|:.:||:.....|
  Fly   129 QIARLFGFEEALSN---GELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFCLKT 190

 Worm   249 IPDFQV-----------------------------THLMPPHNETVVLPNGT------------- 271
            .|.|:|                             ||..  |..::..|:|:             
  Fly   191 HPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQY--HQHSITPPSGSIGPTFRVTNYTSY 253

 Worm   272 -------------VTVVQKVEQMRVE----------------------------------HPAFV 289
                         :..::..::.|::                                  |.||.
  Fly   254 SSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAFF 318

 Worm   290 FTERICIAFFTVEYCLRFFAAPRKLRFALKPLNLVDLLAIVPFYLELLLTLCGVDDRKLRDLRWA 354
            :.|.:|..:|.:|..:|...:|...:|...|:|::|..|.:.||.:::..:     .:...|..|
  Fly   319 YVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDVMQRM-----GEYTGLLEA 378

 Worm   355 FLVVRILRVLRVIRIIKLGRFSSGLQTFGMTLQRSQKQLQMMTIVLLTGVVFFSTMIYFLEK--D 417
            |.:|||:      |:.||.|.|.||:....|.:.|.|:|.::...|:.|:|||:::.|:.||  |
  Fly   379 FSIVRIM------RLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAEKLQD 437

 Worm   418 EEGTPFTSIPAAYWWCIVTMTTVGYGDAVPATTMGKIIASAAIMCGVLVLALPITIIVDNF 478
            .....|.|||...||.|||||||||||..|.|..|..:.:...:.|||.:|||:.:||.||
  Fly   438 NPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVSNF 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exp-2NP_001367760.1 BTB_2 79..178 CDD:426665 29/97 (30%)
Ion_trans 292..478 CDD:459842 67/187 (36%)
ShawlNP_001097131.2 BTB_Shaw-like 4..115 CDD:349723 31/115 (27%)
Ion_trans 307..506 CDD:459842 72/203 (35%)

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