DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment pqn-51 and stnB

DIOPT Version :9

Sequence 1:	NP_001379665.1	Gene:	pqn-51 / 178893	WormBaseID:	WBGene00004136	Length:	354	Species:	Caenorhabditis elegans
Sequence 2:	NP_001036318.2	Gene:	stnB / 4379834	FlyBaseID:	FBgn0016975	Length:	1262	Species:	Drosophila melanogaster

Alignment Length:	341	Identity:	70/341 - (20%)
Similarity:	123/341 - (36%)	Gaps:	126/341 - (36%)

- Green bases have known domain annotations that are detailed below.

Worm     5 NGIAELYKSVMADVIANMKEAFLDENIDVDVLSQLRKEWEDKVNSSGCVDLES--NAPPPAPRQQ 67
            :|:|:|     .||..:...:...:.|:.|::|.:          :|.|.|::  ..|...|..|
  Fly   173 SGLADL-----LDVSVDSGSSAHTQGIEADLISGV----------AGGVRLDNPFAVPTAVPNIQ 222

Worm    68 HHV--------------PPSAVRPNPMPPQRPVAQQPVRALSALH---AAHIGDAPIRMAYTG-- 113
            ..|              ||....|.|.||.:...|:|...|:|::   ||...|..:.|..|.
  Fly   223 AAVPLPATPIKQPPRPPPPRPAPPRPAPPGQAAPQRPPPPLAAVNPPPAAPEADDLLDMFGTTAC 287

Worm   114 QPTQHPSQVRMFNPQFQGGIHFQPGQVFVVQQPNGQNIPMSIMPNQIPQHRIIH--------QGQ 170
            :|.:.|.      |:.:..|      :.:.:||   ::|:| .|...|.  ::|        :|:
  Fly   288 KPAKPPP------PKSKEDI------LSLFEQP---HVPLS-QPASKPD--LLHDDLDETIGEGE 334

Worm   171 PQQAQQQQPQQGNQL------------------TH--MNQMDGNVGSE---SDGEGPSGPVKLAP 212
            |.:.::...:|.|::                  ||  .:|.....|.|   ::...|||.
  Fly   335 PPEQEEPDTEQSNEISSRDEPVFTSLLIRPDESTHDITSQPQAATGLERQVNNMAAPSGT----- 394

Worm   213 KKTKCSLRVRGSGASEKKAMKVLGSLLKDFQLDGGGGGMSDSSSEDEP--DDDDDPLRRIADRMG 275
                         ||.::|      ...|.::         ::.||.|  ||:|:|     :.|.
  Fly   395 -------------ASTQRA------TTPDIEI---------TTVEDLPRSDDEDEP-----EAMQ 426

Worm   276 NGEVEDGDQV-AEEEP 290
            ..|.|...|: .:.||
  Fly   427 EPETETKPQIEPDTEP 442

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
pqn-51	NP_001379665.1	TFIIA	10..354	CDD:397322	68/336 (20%)
pqn-51	NP_001379665.1	TFIIA_alpha_beta_like	<308..354	CDD:199899
stnB	NP_001036318.2	Trypan_PARP	377..496	CDD:114603	22/104 (21%)
stnB	NP_001036318.2	AP_MHD_Cterm	897..1219	CDD:299401
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1533
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030