DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myh6 and Prm

DIOPT Version :9

Sequence 1:XP_006518740.1 Gene:Myh6 / 17888 MGIID:97255 Length:1939 Species:Mus musculus
Sequence 2:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster


Alignment Length:832 Identity:291/832 - (34%)
Similarity:498/832 - (59%) Gaps:15/832 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse  1104 LQLQKKLKENQARIEELEEELEAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKK 1168
            :|....|...:.:|..|:::||.||..|.::|:.::|||.::.::|||||||.|....|.|.|:|
  Fly    31 IQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRK 95

Mouse  1169 REAEFQKMRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDV 1233
            |:||..|:|:.||:..|:.|.|...|:|||.:.:.:..||::.|.:.|.:.||:|::|:.|:.::
  Fly    96 RDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYEL 160

Mouse  1234 TSNMEQIIKAKANLEKVSRTLEDQANEYRVKLEEAQRSLNDFTTQRAKLQTENGELARQLEEKEA 1298
            .|.:|...|.|...||....||...:|..||:||..|::.|.::.|::|..||.||.:.:::.:.
  Fly   161 LSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKV 225

Mouse  1299 LISQLTRGKLSYTQQMEDLKRQLEEEGKAKNALAHALQSSRHDCDLLREQYEEEMEAKAELQRVL 1363
            .:..::..|.....|:||.:|:||:|.:.::.|..:|.....:.|.:|.|.|||.||:.:|:|.|
  Fly   226 QLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQL 290

Mouse  1364 SKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKTKHRLQNEIE 1428
            .|||::...|:.|:.::...|.||:||.::|...|:.:.||.:|::..|.::|||.|.||.:|:|
  Fly   291 VKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVE 355

Mouse  1429 DLMVDVERSNAAAAALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEES 1493
            .|::|:|:||.:...|.|.....:|...|.|.:.:|:....|:||::.::...:|.:..:..::.
  Fly   356 VLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKV 420

Mouse  1494 LEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKIRKQLEVEKLELQSALEEAEASLEHEEG 1558
            .::.....||||.|.:::.:....:.|..:.:||||...::||.|:.||.:|.:||||..:.||.
  Fly   421 KDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQ 485

Mouse  1559 KILRAQLEFNQIKAEIERKLAEKDEEMEQAKRNHLRMVDSLQTS-LDAETRSRNEALRVKKKMEG 1622
            :..|...:|||.:.:.||:|||||||:|..::.....::.|... ::||||.:.|..|:|||::.
  Fly   486 RGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQI 550

Mouse  1623 DLNEMEIQLSQANRIASEAQKHLKNS-------QAHLKDTQLQLDDAVHANDDLKENIAIVERRN 1680
            .:.|:|:.|..||:...:.||.:|..       |||.:|.|.||...:       :..|:.:||.
  Fly   551 QITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATL-------DQYAVAQRRL 608

Mouse  1681 NLLQAELEELRAVVEQTERSRKLAEQELIETSERVQLLHSQNTSLINQKKKMESDLTQLQTEVEE 1745
            ..|..||||:|:.::...|:::..|.:..|.:.|:..|.:.|.||::.|.|:|.:|:.:.::.||
  Fly   609 AGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEE 673

Mouse  1746 AVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGG 1810
            ..:|.|.::|:.:|...:...:.|::.:||:....||.:||::|..:|:|..||:|.|..|:.|.
  Fly   674 VSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGS 738

Mouse  1811 KKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEEDKKNLMRLQDLVDKLQL 1875
            |:.:.|||||:|:||.|||.|::|:||::|.:||.||.:||:..|.|||:|||:.|||.:||...
  Fly   739 KRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTA 803

Mouse  1876 KVKAYKRQAEEAEEQANTNLSKFRKVQHELDEAEERADIAESQVNKLRAKSR 1927
            |:..|:||..|.|..:....::.|:.|.||:.||:|||.|||.:|.:|||.|
  Fly   804 KINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myh6XP_006518740.1 Myosin_N 34..72 CDD:367160
MYSc_class_II 99..768 CDD:276951
Myosin_tail_1 848..1925 CDD:366712 288/828 (35%)
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 287/825 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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