DRSC/TRiP Functional Genomics Resources

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Protein Alignment nas-9 and Cubn

DIOPT Version :10

Sequence 1:NP_741532.1 Gene:nas-9 / 178875 WormBaseID:WBGene00003528 Length:546 Species:Caenorhabditis elegans
Sequence 2:NP_727348.2 Gene:Cubn / 326235 FlyBaseID:FBgn0052702 Length:3750 Species:Drosophila melanogaster


Alignment Length:585 Identity:117/585 - (20%)
Similarity:186/585 - (31%) Gaps:191/585 - (32%)


- Green bases have known domain annotations that are detailed below.


 Worm    56 GGVDLGHLIGNIAANVGQEMGLNDADVIGDLRGISRG-PRPSSMEWGRRA---RHFCRRYPGHPK 116
            |.:|....||......|::..|...|:..::...:.. |.||.......|   .|:.:.|.| |.
  Fly  2786 GAIDCAWAIGPYTDASGEDEVLVPQDIQLEVSVYNVNLPAPSPSAQSPEAPCLHHYLKVYNG-PD 2849

 Worm   117 CQRGQLPQFTDVPTIINTII-------YNAGDLLPRVPTLNIH------------DPLAGL---- 158
            .....|..|.:..|.:|.::       |:: |......|.|:.            .|...:    
  Fly  2850 QNSPSLGLFCNQATAVNMVVERGLFLEYHS-DSFSANATFNVSIKYGSGCGGKLVYPYRAIDFAE 2913

 Worm   159 ----NSELVGFIKSLQSQFGQLSSQQRNEIHDS--C-RSFKCDQQSPQNTQAKQELLTKMLAFDQ 216
                |.|.:..:::.......|:.|.|..|.||  | :.:...||..:.|....:|        |
  Fly  2914 QYKNNVECIWEVEATMGYHIGLTFQGRFYIEDSPGCTKDYLLVQQRNETTGNWTDL--------Q 2970

 Worm   217 AVGGKAAPAHDKVNLRFDRTQQVKQALLKRANLSHIIVPADNGVFDRDVLLTEHQANFLLN---E 278
            .:.|:.||  :.:|     |......|:.|:              |.||:.....|.|..|   .
  Fly  2971 RICGRVAP--EMIN-----TTSPYLRLIFRS--------------DGDVVADGFLAKFERNCGGL 3014

 Worm   279 LGEAGRGADVGAGGGGGGR----------VPRS----GVFFQESAVQKWDIWK-PIQYTLDDSLE 328
            |.......::.:.|...|.          ||||    ||..   :...:|:.: ||...|.|:|.
  Fly  3015 LYADSTEQELASPGFPNGYEKYLQCNWTIVPRSPSMGGVLV---SFVNFDLEQGPISVCLYDNLT 3076

 Worm   329 ESDKKDIRDALHEISINTCILFRYNATPKGYHLNYMKVDSTTFCGL---------SYVG---RTD 381
            .:.|...:|.                            ..||.||:         .||.   |||
  Fly  3077 VTTKDKGKDP----------------------------QQTTLCGVKHNHEYRGKEYVNLLLRTD 3113

 Worm   382 PA------NPIYLSFQCGDNRGVAMHETMHALGVSHQHLRL--DRDKYIKIDWSNIDPQHYDTFA 438
            .:      ..:|.|..||   |:....:|....|.|....|  ..|.|    |:...|..| .|.
  Fly  3114 GSYSGRGFTLLYTSRLCG---GIISRTSMVESPVQHTDNTLPPGSDCY----WNLTAPAGY-KFN 3170

 Worm   439 ISDAKLYTSYGTKYAYDSI-----------MHYNAYLGAKDPNKPTMIPLVN-PQE--------- 482
            |....:.....:..|||.:           ..:..:.|..:.:    :||:: |||         
  Fly  3171 IKFLFIDFEANSNCAYDGVEVFSGPIPDERYRWGRFCGRINED----LPLISIPQERGIIHSFSD 3231

 Worm   483 -NTPKLGQRAKLTRGDIRLLKKMYCRPGCDDQNVHCGTWALHG-----YCKMKEQMKWMNE-NCK 540
             ..|..|.||        |::.|   |.||::      .:|:|     |.|......:.|: :|:
  Fly  3232 DRDPSRGFRA--------LVRVM---PNCDEK------ISLNGSSRYVYSKFNNAGGYQNDLDCQ 3279

 Worm   541  540
              Fly  3280  3279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nas-9NP_741532.1 Astacin 311..505 CDD:426242 47/236 (20%)
ShKT 510..546 CDD:214586 8/37 (22%)
CubnNP_727348.2 cubilin_NTD 21..149 CDD:412063
EGF_CA 156..190 CDD:238011
EGF_CA 192..233 CDD:238011
EGF_CA 282..322 CDD:214542
EGF_CA 324..367 CDD:214542
EGF 430..457 CDD:394967
EGF_CA 469..503 CDD:238011
CUB 509..622 CDD:238001
CUB 627..737 CDD:238001
CUB 744..849 CDD:412131
CUB 853..970 CDD:238001
CUB 978..1094 CDD:238001
CUB 1100..1211 CDD:238001
CUB 1216..1330 CDD:238001
CUB 1446..1549 CDD:238001
CUB 1554..1667 CDD:238001
CUB 1792..1899 CDD:238001
CUB 1910..1998 CDD:412131
CUB 2019..2133 CDD:238001
CUB 2140..2242 CDD:238001
CUB 2263..2379 CDD:238001
CUB 2385..2511 CDD:238001
CUB 2516..2630 CDD:238001
CUB <2833..2892 CDD:412131 13/60 (22%)
CUB 2898..3008 CDD:238001 26/138 (19%)
CUB 3011..3127 CDD:238001 27/146 (18%)
CUB 3130..3241 CDD:238001 25/122 (20%)
CUB 3254..3363 CDD:238001 6/26 (23%)
CUB 3379..3508 CDD:238001
CUB 3531..3601 CDD:412131
CUB 3623..3733 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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