DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myh4 and Prm

DIOPT Version :9

Sequence 1:NP_034985.2 Gene:Myh4 / 17884 MGIID:1339713 Length:1939 Species:Mus musculus
Sequence 2:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster


Alignment Length:819 Identity:287/819 - (35%)
Similarity:492/819 - (60%) Gaps:1/819 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse  1112 IKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQ 1176
            :..|:.:|..|::::|.||..|.:.|::::|||.::.::|||||||.|....|.|.|:||:||..
  Fly    37 LSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDAELL 101

Mouse  1177 KMRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNMET 1241
            |:|:.||:..|:.|.|...|:|||.:.:.:..||::.|.:.|.:.||:|::.:.|:.:|.|.:|:
  Fly   102 KLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIES 166

Mouse  1242 VSKAKGNLEKMCRTLEDQLSEVKTKEEEQQRLINELSTQKARLHTESGEFSRQLDEKDAMVSQLS 1306
            .:|.|...||....||..:||:..|.||..|.:.::|:.::||..|:.|.::.:.:....:..:|
  Fly   167 YNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTVS 231

Mouse  1307 RGKQAFTQQIEELKRQLEEESKAKNALAHALQSARHDCDLLREQYEEEQEAKAELQRAMSKANSE 1371
            ..|.....|:|:.:|:||:|.:.::.|..:|.....:.|.:|.|.|||.||:.:|:|.:.|||::
  Fly   232 FSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLVKANAD 296

Mouse  1372 VAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNSKCASLEKTKQRLQNEVEDLMIDV 1436
            ...|:.|:.::...|.||:||.::|...|:.:.|||:|::..|..:|||.|.||.:|||.|:||:
  Fly   297 ATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDL 361

Mouse  1437 ERSNAACAALDKKQRNFDKVLAEWKQKYEETQAELEASQKESRSLSTELFKVKNAYEESLDQLET 1501
            |:||.:|..|.|.....:|...|.|.:.:||....|.||::.::...:|.:..:..::..|....
  Fly   362 EKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQ 426

Mouse  1502 LKRENKNLQQEISDLTEQIAEGGKHIHELEKIKKQIDQEKSELQASLEEAEASLEHEEGKILRIQ 1566
            |.||||.|..::.:....|.|..:.:||||...::::.|:.||.|:.:||||..:.||.:..|:.
  Fly   427 LTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQRGQRLA 491

Mouse  1567 LELNQVKSEIDRKIAEKDEEIDQLKRNHLRVVESMQS-TLDAEIRSRNDALRIKKKMEGDLNEME 1630
            .:.||.:.:.:|::|||||||:.:::.....:|.:.: .::||.|.:.:..|||||::..:.|:|
  Fly   492 ADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELE 556

Mouse  1631 IQLNHANRQAAEAIRNLRNTQGMLKDTQLHLDDALRGQDDLKEQLAMVERRANLMQAEIEELRAS 1695
            :.|:.||:...:..:.::.....|.:.|.|.:|..|......:|.|:.:||...:..|:||:|:.
  Fly   557 MSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSH 621

Mouse  1696 LEQTERSRRVAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAK 1760
            |:...|::|..|.:..:|:.|:..|.|.|.||::.|.|||.::|.:..:.|::.:|.|.::|:.:
  Fly   622 LDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQ 686

Mouse  1761 KAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRE 1825
            |...:...:.|::.:||:....||.:||::|..||:|..||:|.|..|:.|.|:.|.|||||:|:
  Fly   687 KVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRD 751

Mouse  1826 LENEVENEQKRNIEAVKGLRKHERRVKELTYQTEEDRKNVLRLQDLVDKLQTKVKAYKRQAEEAE 1890
            ||.|:|.|::|:.|.:|.|||.||.|||:..|.|||:||::.|||.:||...|:..|:||..|.|
  Fly   752 LELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQE 816

Mouse  1891 EQSNVNLAKFRKIQHELEEAEERADIAESQVNKLRVKSR 1929
            ..|.....:.|:.|.|||.||:|||.|||.:|.:|.|.|
  Fly   817 GVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myh4NP_034985.2 Myosin_N 35..73 CDD:308391
MYSc_Myh4 100..770 CDD:276879
Actin-binding. /evidence=ECO:0000250 659..681
Actin-binding. /evidence=ECO:0000250 761..775
SMC_N 850..1927 CDD:330553 285/815 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1128..1147 7/18 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1153..1172 10/18 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1276..1299 5/22 (23%)
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 285/815 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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